Strain Fitness in Shewanella oneidensis MR-1 around SO2185

Experiment: Paraquat dichloride 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.125 mg/ml
2,293,943	-				+0.7
2,293,987	+				-0.2
2,294,027	+				+0.1
2,294,203	-		SO2183	0.34	-0.1
2,294,216	+		SO2183	0.36	+0.2
2,294,216	+		SO2183	0.36	+0.9
2,294,298	-		SO2183	0.52	+0.3
2,294,313	-		SO2183	0.55	-0.5
2,294,431	-		SO2183	0.78	+0.8
2,294,460	+		SO2183	0.84	+0.9
2,294,527	+				+0.6
2,294,527	+				+0.3
2,294,527	+				+0.6
2,294,527	-				-0.1
2,294,535	-				-0.1
2,294,730	-				+1.2
2,294,824	+				+0.4
2,294,824	+				-0.6
2,294,859	+				+0.9
2,294,937	-				+1.9
2,294,976	+				-0.2
2,294,978	-				+0.3
2,295,005	+				-0.2
2,295,083	+	ppx	SO2185	0.11	-0.3
2,295,202	+	ppx	SO2185	0.18	-0.2
2,295,202	+	ppx	SO2185	0.18	+0.1
2,295,352	+	ppx	SO2185	0.28	+0.3
2,295,394	+	ppx	SO2185	0.31	+0.7
2,295,671	+	ppx	SO2185	0.48	+0.4
2,295,903	+	ppx	SO2185	0.63	+1.2
2,296,083	+	ppx	SO2185	0.75	-0.2
2,296,088	+	ppx	SO2185	0.75	-0.7
2,296,096	-	ppx	SO2185	0.76	-0.1
2,296,144	+	ppx	SO2185	0.79	+0.4
2,296,151	+	ppx	SO2185	0.79	+0.5
2,296,199	+	ppx	SO2185	0.82	+0.7
2,296,199	+	ppx	SO2185	0.82	-0.1
2,296,207	-	ppx	SO2185	0.83	-0.7
2,296,483	-				+0.4
2,296,522	+				+0.0
2,296,687	+		SO_2186	0.10	+0.2
2,296,695	-		SO_2186	0.11	-0.3
2,296,695	-		SO_2186	0.11	-0.1
2,296,695	-		SO_2186	0.11	+0.2
2,296,809	+		SO_2186	0.18	+0.5
2,296,870	+		SO_2186	0.21	+0.2
2,296,878	-		SO_2186	0.22	+0.2
2,296,878	-		SO_2186	0.22	-0.5
2,297,263	+		SO_2186	0.45	-0.5
2,297,263	+		SO_2186	0.45	-0.2
2,297,263	+		SO_2186	0.45	-0.4
2,297,271	-		SO_2186	0.46	+0.3
2,297,271	-		SO_2186	0.46	+0.1
2,297,282	-		SO_2186	0.46	-0.1
2,297,355	-		SO_2186	0.51	+0.5
2,297,369	+		SO_2186	0.52	-0.0
2,297,369	+		SO_2186	0.52	+0.3