Strain Fitness in Shewanella oneidensis MR-1 around SO2108

Experiment: Paraquat dichloride 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.125 mg/ml
2,204,830	+	mdoG-1	SO2107	0.36	-3.0
2,204,838	-	mdoG-1	SO2107	0.37	+0.2
2,205,017	-	mdoG-1	SO2107	0.49	-0.2
2,205,227	-	mdoG-1	SO2107	0.63	-0.8
2,205,254	-	mdoG-1	SO2107	0.65	+0.4
2,205,277	+	mdoG-1	SO2107	0.66	+0.1
2,205,277	+	mdoG-1	SO2107	0.66	+0.5
2,205,390	+	mdoG-1	SO2107	0.74	-0.9
2,205,854	-				-2.1
2,205,933	+				-1.4
2,206,500	+	mdoH	SO2108	0.32	-1.0
2,206,771	-	mdoH	SO2108	0.44	-4.0
2,206,779	+	mdoH	SO2108	0.44	-2.2
2,206,900	-	mdoH	SO2108	0.50	-2.0
2,206,990	+	mdoH	SO2108	0.54	-2.7
2,207,270	+	mdoH	SO2108	0.67	-2.1
2,207,278	-	mdoH	SO2108	0.67	-2.4
2,207,370	+	mdoH	SO2108	0.72	+1.5
2,207,485	+	mdoH	SO2108	0.77	-1.1
2,207,537	+	mdoH	SO2108	0.79	-1.8
2,207,636	+	mdoH	SO2108	0.84	-2.5
2,207,715	+	mdoH	SO2108	0.87	-1.1
2,207,715	+	mdoH	SO2108	0.87	-0.9
2,207,723	-	mdoH	SO2108	0.88	+1.1
2,207,723	-	mdoH	SO2108	0.88	-1.8
2,208,137	+				-0.6
2,208,158	+				-1.2
2,208,176	+				+0.1
2,208,176	+				-1.2
2,208,176	+				-0.4
2,208,176	+				-0.2
2,208,176	-				+0.2
2,208,184	-				+0.6
2,208,223	+				-0.9
2,208,278	-				-1.1
2,208,438	-		SO2109	0.20	-0.1
2,208,573	+		SO2109	0.29	-1.6
2,208,628	+		SO2109	0.32	-0.2
2,208,628	-		SO2109	0.32	-0.3
2,208,742	-		SO2109	0.40	-1.3
2,208,742	-		SO2109	0.40	+0.7
2,208,764	-		SO2109	0.41	-0.3
2,208,764	-				+1.1
2,208,782	+		SO2109	0.42	+0.9
2,208,888	+		SO2109	0.49	-1.8