Strain Fitness in Shewanella oneidensis MR-1 around SO1726
Experiment: Paraquat dichloride 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,814,066 | + | -0.2 | |||
1,814,088 | - | +0.2 | |||
1,814,294 | + | +0.6 | |||
1,814,321 | + | +0.4 | |||
1,814,501 | - | +1.1 | |||
1,814,523 | - | +0.4 | |||
1,814,731 | + | SO1727 | 0.50 | +0.5 | |
1,814,798 | + | SO1727 | 0.63 | -0.4 | |
1,814,798 | + | SO1727 | 0.63 | -0.5 | |
1,814,798 | + | SO1727 | 0.63 | +0.8 | |
1,814,806 | - | SO1727 | 0.65 | +0.1 | |
1,814,819 | - | SO1727 | 0.67 | +0.6 | |
1,814,819 | - | SO1727 | 0.67 | -0.1 | |
1,814,887 | - | SO1727 | 0.81 | +0.5 | |
1,814,898 | + | SO1727 | 0.83 | -0.3 | |
1,814,904 | - | SO1727 | 0.84 | +0.7 | |
1,814,904 | - | SO1727 | 0.84 | +0.7 | |
1,814,904 | - | SO1727 | 0.84 | +0.1 | |
1,814,906 | - | SO1727 | 0.84 | -0.4 | |
1,814,923 | - | SO1727 | 0.88 | +0.1 | |
1,814,923 | - | SO1727 | 0.88 | +0.1 | |
1,814,967 | - | +0.2 |
Or see this region's nucleotide sequence