Strain Fitness in Shewanella oneidensis MR-1 around SO1503

Experiment: Paraquat dichloride 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.125 mg/ml
1,575,460	+		SO1502	0.24	+0.1
1,575,720	+		SO1502	0.48	+0.6
1,575,825	+		SO1502	0.58	+0.0
1,575,825	+		SO1502	0.58	+0.6
1,575,891	-		SO1502	0.64	+0.2
1,575,891	-		SO1502	0.64	+0.2
1,575,944	+		SO1502	0.68	+0.1
1,576,008	+		SO1502	0.74	+0.5
1,576,107	-		SO1502	0.83	+0.4
1,576,108	-		SO1502	0.83	-0.1
1,576,181	-				-1.5
1,576,263	+				-0.0
1,576,263	+				+0.6
1,576,263	+				-0.1
1,576,271	-				+1.9
1,576,271	-				+0.3
1,576,271	-				-0.0
1,576,675	+		SO1503	0.48	-0.0
1,576,716	-		SO1503	0.53	+0.5
1,576,778	+		SO1503	0.61	+0.5
1,576,815	-		SO1503	0.66	+0.1
1,576,830	+		SO1503	0.68	+0.8
1,576,870	-		SO1503	0.73	+0.4
1,576,920	+		SO1503	0.79	+0.3
1,576,938	-		SO1503	0.82	-0.7
1,576,938	-		SO1503	0.82	-0.0
1,576,939	-		SO1503	0.82	+0.0
1,576,939	-		SO1503	0.82	-0.4
1,577,095	-				+0.8
1,577,104	-				-0.2
1,577,125	+				-0.2
1,577,133	-				-0.8
1,577,133	-				+0.2
1,577,133	-				-0.3
1,577,133	-				-0.5
1,577,142	+				+0.6
1,577,159	+				+0.3
1,577,167	-				+0.5
1,577,183	-				+0.2
1,577,183	-				+0.0
1,577,202	+				+0.4
1,577,207	+				+0.7
1,577,210	-				+0.2
1,577,317	+				-0.7
1,577,317	+				+0.3
1,577,338	+				-0.2
1,577,346	-				+0.4
1,577,355	+				-0.1
1,577,360	+				+0.3
1,577,378	+				+0.2
1,577,378	+				+0.3
1,577,386	-				+0.5
1,577,391	-				+0.3
1,577,457	-		SO1504	0.18	+0.4
1,577,485	+		SO1504	0.22	+0.3
1,577,485	+		SO1504	0.22	-0.4
1,577,493	-		SO1504	0.24	+0.2
1,577,493	-		SO1504	0.24	+0.0
1,577,554	+		SO1504	0.34	+0.9
1,577,654	-		SO1504	0.51	+0.2
1,577,654	-		SO1504	0.51	+0.6
1,577,689	-		SO1504	0.57	+0.6
1,577,689	-		SO1504	0.57	-0.1
1,577,741	-		SO1504	0.65	+0.1
1,577,798	+		SO1504	0.75	-0.1
1,577,798	+		SO1504	0.75	+0.0
1,577,843	-		SO1504	0.82	-0.2
1,577,869	+		SO1504	0.87	+0.0
1,577,878	-		SO1504	0.88	+0.9
1,577,879	+		SO1504	0.89	+0.2
1,577,880	+		SO1504	0.89	+0.4
1,577,880	+		SO1504	0.89	+1.1
1,577,880	+		SO1504	0.89	+0.4
1,577,887	+				-0.1
1,577,888	-				+0.5
1,577,888	-				+1.1
1,577,888	-				-0.0
1,577,894	+				+1.1
1,577,895	-				+0.5
1,577,902	-				+0.0
1,577,902	-				+0.4
1,577,940	+				-0.2
1,577,940	+				+0.0
1,577,940	+				-1.6
1,577,940	+				-0.4
1,577,948	-				-0.9
1,577,948	-				+0.5
1,577,948	-				+0.3
1,577,948	-				-0.1
1,577,948	-				-0.1
1,578,001	+				-1.1
1,578,018	+				-0.3
1,578,020	+				+0.5
1,578,026	+				+0.1
1,578,027	+				-0.7
1,578,027	+				-0.1
1,578,027	+				+0.4
1,578,027	+				-0.1
1,578,027	+				-0.3
1,578,032	+				+0.8
1,578,032	+				-1.2
1,578,032	+				+0.5
1,578,037	+				-0.2
1,578,045	-				-0.7
1,578,045	-				-0.4
1,578,045	-				+0.3
1,578,045	-				-0.2
1,578,045	-				-0.2
1,578,045	-				+0.4
1,578,045	-				+0.0
1,578,076	-				+0.9