Strain Fitness in Shewanella oneidensis MR-1 around SO1346

Experiment: Paraquat dichloride 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.125 mg/ml
1,401,235	+	rseB	SO1344	0.84	+0.5
1,401,278	+	rseB	SO1344	0.88	-0.1
1,401,935	+				+0.5
1,401,994	+				-0.3
1,402,134	-				-2.7
1,402,382	+	lepA	SO1346	0.19	-0.7
1,402,502	+	lepA	SO1346	0.26	-0.9
1,402,711	-	lepA	SO1346	0.38	-1.2
1,402,912	+	lepA	SO1346	0.49	-0.4
1,403,034	+	lepA	SO1346	0.56	-0.8
1,403,034	+	lepA	SO1346	0.56	-0.9
1,403,067	+	lepA	SO1346	0.57	-1.1
1,403,628	+	lepA	SO1346	0.89	-0.3
1,403,693	+				+0.1
1,403,693	+				+0.1
1,403,878	+				-0.6
1,404,156	+	lepB	SO1347	0.16	-1.2
1,404,445	+	lepB	SO1347	0.48	-1.7
1,404,467	+	lepB	SO1347	0.50	-2.0
1,404,559	+	lepB	SO1347	0.60	-2.1
1,404,608	+	lepB	SO1347	0.65	-1.4
1,404,764	+	lepB	SO1347	0.82	-3.7