Strain Fitness in Shewanella oneidensis MR-1 around SO1043

Experiment: Paraquat dichloride 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.125 mg/ml
1,080,552	-				+0.7
1,080,558	-				-0.4
1,080,560	+				+0.4
1,080,578	+				+0.5
1,080,581	+				+0.9
1,080,581	+				+0.2
1,080,581	+				+0.6
1,080,581	-				-0.3
1,080,581	-				-0.3
1,080,586	-				-0.4
1,080,589	+				+0.1
1,080,589	-				-0.3
1,080,589	-				+0.5
1,080,589	-				+0.5
1,080,589	-				-0.4
1,080,589	-				-0.1
1,080,589	-				-0.2
1,080,596	+				+0.2
1,080,596	+				+0.2
1,080,604	-				-0.1
1,080,604	-				+0.9
1,080,604	-				+0.2
1,080,604	-				-1.1
1,080,670	-				-0.4
1,080,706	+				-0.8
1,080,727	-				-0.6
1,080,732	-				-0.2
1,080,734	-				+0.1
1,080,746	-				-0.2
1,080,796	+				+0.2
1,080,797	+				-0.4
1,080,832	+				+0.3
1,080,832	+				-0.1
1,080,832	+				-0.3
1,080,861	-				+0.3
1,080,861	-				+0.0
1,080,865	+				+0.0
1,080,880	+				+0.3
1,080,943	+		SO1042	0.16	-0.1
1,080,951	-		SO1042	0.17	-0.7
1,080,951	-		SO1042	0.17	+0.1
1,080,991	+		SO1042	0.22	-0.4
1,080,991	+		SO1042	0.22	+0.0
1,080,999	-		SO1042	0.23	+0.1
1,081,012	+		SO1042	0.25	-0.0
1,081,079	-		SO1042	0.34	-0.2
1,081,116	+		SO1042	0.40	-0.4
1,081,147	+		SO1042	0.44	-0.4
1,081,154	-		SO1042	0.45	+0.6
1,081,217	+		SO1042	0.53	+0.2
1,081,410	+		SO1042	0.80	-0.3
1,081,410	+		SO1042	0.80	+0.5
1,081,418	-		SO1042	0.81	-0.9
1,081,455	+		SO1042	0.86	+1.1
1,081,460	+		SO1042	0.87	+0.3
1,081,476	-		SO1042	0.89	+0.0
1,081,566	-				+0.2
1,081,585	+				-0.5
1,081,585	+				+0.1
1,081,585	+				+0.7
1,081,593	-				-0.1
1,081,593	-				-0.1
1,081,598	+				+1.8
1,081,613	-				-0.2
1,081,614	+				-0.7
1,081,622	-		SO1043	0.11	-0.4
1,081,631	+		SO1043	0.12	+0.4
1,081,631	+		SO1043	0.12	+0.2
1,081,631	+		SO1043	0.12	+0.4
1,081,631	+		SO1043	0.12	-0.5
1,081,631	+		SO1043	0.12	+0.1
1,081,639	+		SO1043	0.14	-0.0
1,081,639	-		SO1043	0.14	+0.4
1,081,639	-		SO1043	0.14	+0.1
1,081,639	-		SO1043	0.14	+0.3
1,081,639	-		SO1043	0.14	+0.7
1,081,647	-		SO1043	0.15	+0.3
1,081,647	-		SO1043	0.15	-0.1
1,081,651	+		SO1043	0.15	-0.9
1,081,696	-		SO1043	0.22	+0.5
1,081,701	-		SO1043	0.23	+0.3
1,081,728	-		SO1043	0.27	+1.0
1,081,815	+		SO1043	0.39	+0.2
1,081,825	+		SO1043	0.41	-0.8
1,081,825	+		SO1043	0.41	+0.2
1,081,827	-		SO1043	0.41	+0.3
1,081,833	-		SO1043	0.42	+0.1
1,081,833	-		SO1043	0.42	+0.8
1,081,833	-		SO1043	0.42	+0.1
1,081,855	-		SO1043	0.45	-0.2
1,081,918	-		SO1043	0.54	+0.0
1,081,999	+		SO1043	0.66	+0.5
1,082,090	+		SO1043	0.80	+0.1
1,082,090	+		SO1043	0.80	+0.1
1,082,098	-		SO1043	0.81	+0.9
1,082,098	-		SO1043	0.81	-0.4
1,082,136	-		SO1043	0.86	+0.4
1,082,266	-				+0.3
1,082,314	-		SO1044	0.11	+0.9
1,082,657	-		SO1044	0.58	+0.2
1,082,667	+		SO1044	0.59	-0.3
1,082,700	+		SO1044	0.64	+0.0
1,082,724	-		SO1044	0.67	+0.9
1,082,854	+		SO1044	0.84	-0.3
1,082,901	+				+0.0
1,082,934	+				+0.5
1,082,934	+				-0.0
1,082,942	-				-0.6
1,082,942	-				-1.9
1,082,942	-				-1.0
1,082,942	-				-0.2
1,082,942	-				-0.0