Strain Fitness in Shewanella amazonensis SB2B around Sama_2970

Experiment: D-Cellobiose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose
3,535,006	+				+0.7
3,535,007	-				-0.3
3,535,007	-				-0.0
3,535,007	-				+0.5
3,535,077	-				-1.3
3,535,097	-				+0.2
3,535,123	+				+0.5
3,535,123	+				-0.2
3,535,123	+				+0.8
3,535,123	+				-0.7
3,535,124	-				-0.2
3,535,124	-				-0.2
3,535,124	-				+0.2
3,535,124	-				-1.0
3,535,144	+				-0.5
3,535,144	+				+0.8
3,535,144	+				+0.5
3,535,144	+				-0.5
3,535,144	+				+1.6
3,535,144	+				+0.2
3,535,149	-				-1.3
3,535,149	-				+0.1
3,535,149	-				+0.1
3,535,242	-		Sama_2969	0.11	-0.6
3,535,262	+		Sama_2969	0.14	+0.6
3,535,262	+		Sama_2969	0.14	-0.9
3,535,262	+		Sama_2969	0.14	+0.4
3,535,263	-		Sama_2969	0.15	-0.7
3,535,263	-		Sama_2969	0.15	+1.2
3,535,263	-		Sama_2969	0.15	-1.8
3,535,263	-		Sama_2969	0.15	+0.1
3,535,406	+		Sama_2969	0.36	+2.5
3,535,406	+		Sama_2969	0.36	+0.2
3,535,406	+		Sama_2969	0.36	+0.6
3,535,407	-		Sama_2969	0.36	+0.1
3,535,407	-		Sama_2969	0.36	+1.0
3,535,407	-		Sama_2969	0.36	-1.5
3,535,407	-		Sama_2969	0.36	+0.1
3,535,409	+		Sama_2969	0.36	-0.4
3,535,409	+		Sama_2969	0.36	+1.9
3,535,409	+		Sama_2969	0.36	+0.8
3,535,409	+		Sama_2969	0.36	-0.3
3,535,410	-		Sama_2969	0.36	+1.1
3,535,423	-		Sama_2969	0.38	+0.8
3,535,491	-		Sama_2969	0.48	-0.1
3,535,491	-		Sama_2969	0.48	+0.4
3,535,491	-		Sama_2969	0.48	+1.4
3,535,522	+		Sama_2969	0.53	+0.5
3,535,523	-		Sama_2969	0.53	+0.6
3,535,559	+		Sama_2969	0.58	+0.1
3,535,681	+		Sama_2969	0.76	-0.4
3,535,682	-		Sama_2969	0.77	-1.9
3,535,682	-		Sama_2969	0.77	+0.8
3,535,682	-		Sama_2969	0.77	-0.2
3,535,758	+		Sama_2969	0.88	-0.2
3,535,800	-				+0.6
3,535,806	+				+1.4
3,535,860	+				+1.3
3,535,946	+				+7.5
3,535,952	+				-0.4
3,535,953	-				+0.6
3,535,961	-				-1.3
3,535,961	-				+0.8
3,535,963	+				+0.1
3,535,963	+				-0.8
3,535,963	+				-1.5
3,535,964	-				-0.3
3,535,965	+				+0.3
3,535,965	+				+0.5
3,535,965	+				-0.2
3,535,965	+				-0.7
3,535,965	+				+0.6
3,535,965	+				-0.8
3,535,965	+				+0.1
3,535,966	-				-0.1
3,535,966	-				-0.3
3,535,966	-				-0.2
3,535,966	-				+0.1
3,535,966	-				+0.5
3,535,970	-				+0.4
3,535,996	+				-0.6
3,535,996	+				-0.1
3,535,996	+				+0.8
3,535,997	-				+0.1
3,535,997	-				-0.3
3,536,116	+				+2.4
3,536,117	-				-0.1
3,536,117	-				+0.3
3,536,117	-				-1.1
3,536,117	-				-1.1
3,536,117	-				-0.3
3,536,133	+				+0.4
3,536,204	+		Sama_2970	0.12	+1.1
3,536,219	+		Sama_2970	0.13	+0.1
3,536,219	+		Sama_2970	0.13	+0.4
3,536,219	+		Sama_2970	0.13	+0.5
3,536,220	-		Sama_2970	0.13	-1.8
3,536,268	+		Sama_2970	0.16	+0.1
3,536,269	-		Sama_2970	0.16	+1.1
3,536,326	+		Sama_2970	0.20	-0.5
3,536,326	+		Sama_2970	0.20	+0.1
3,536,326	+		Sama_2970	0.20	+1.8
3,536,327	-		Sama_2970	0.20	+0.3
3,536,327	-		Sama_2970	0.20	-0.9
3,536,327	-		Sama_2970	0.20	-0.4
3,536,362	+		Sama_2970	0.22	-1.1
3,536,363	-		Sama_2970	0.22	-0.4
3,536,404	-		Sama_2970	0.24	-0.5
3,536,496	+		Sama_2970	0.30	-0.5
3,536,528	+		Sama_2970	0.32	+0.2
3,536,528	+		Sama_2970	0.32	+0.6
3,536,528	+		Sama_2970	0.32	+0.4
3,536,529	-		Sama_2970	0.32	-0.3
3,536,555	-		Sama_2970	0.33	-0.0
3,536,581	+		Sama_2970	0.35	-1.3
3,536,671	+		Sama_2970	0.40	+0.3
3,536,671	+		Sama_2970	0.40	-0.4
3,536,671	+		Sama_2970	0.40	+0.2
3,536,672	-		Sama_2970	0.40	+0.5
3,536,672	-		Sama_2970	0.40	+1.3
3,536,672	-		Sama_2970	0.40	+0.1
3,536,742	-		Sama_2970	0.44	+0.4
3,536,752	+		Sama_2970	0.45	-0.3
3,536,753	-		Sama_2970	0.45	-0.9
3,536,753	-		Sama_2970	0.45	-0.1
3,536,821	+		Sama_2970	0.49	+1.0
3,536,821	+		Sama_2970	0.49	-0.6
3,536,821	+		Sama_2970	0.49	+1.1
3,536,821	+		Sama_2970	0.49	+0.2
3,536,821	+		Sama_2970	0.49	-0.3
3,536,821	+		Sama_2970	0.49	-0.6
3,536,822	-		Sama_2970	0.49	+0.1
3,536,822	-		Sama_2970	0.49	+0.8
3,536,825	+		Sama_2970	0.49	+0.1
3,536,825	+		Sama_2970	0.49	+0.1
3,536,825	+		Sama_2970	0.49	-0.5
3,536,825	+		Sama_2970	0.49	-0.6
3,536,825	+		Sama_2970	0.49	-0.7
3,536,825	+		Sama_2970	0.49	+0.1
3,536,825	+		Sama_2970	0.49	-2.1
3,536,826	-		Sama_2970	0.49	-0.5
3,536,826	-		Sama_2970	0.49	-1.9
3,536,826	-		Sama_2970	0.49	+0.1
3,536,826	-		Sama_2970	0.49	+0.1
3,536,826	-		Sama_2970	0.49	-0.2
3,536,826	-		Sama_2970	0.49	+0.1
3,536,826	-		Sama_2970	0.49	-0.2
3,536,826	-		Sama_2970	0.49	-0.4
3,536,826	-		Sama_2970	0.49	-0.6
3,536,826	-		Sama_2970	0.49	-0.0
3,536,826	-		Sama_2970	0.49	+0.5
3,536,826	-		Sama_2970	0.49	+0.1
3,536,826	-		Sama_2970	0.49	-0.5
3,536,828	+		Sama_2970	0.50	-0.3
3,536,829	-		Sama_2970	0.50	+1.1
3,536,829	-		Sama_2970	0.50	-0.9
3,536,923	+		Sama_2970	0.55	-0.6
3,536,924	-		Sama_2970	0.55	+1.2
3,536,924	-		Sama_2970	0.55	+0.6
3,536,924	-		Sama_2970	0.55	-0.1
3,536,924	-		Sama_2970	0.55	+0.6
3,536,924	-		Sama_2970	0.55	+0.6
3,536,925	+		Sama_2970	0.55	+0.6
3,536,925	+		Sama_2970	0.55	-0.7
3,536,926	-		Sama_2970	0.55	-1.3
3,536,926	-		Sama_2970	0.55	+0.6
3,536,931	+		Sama_2970	0.56	-0.2
3,536,931	+		Sama_2970	0.56	-0.9
3,536,932	-		Sama_2970	0.56	-0.4
3,536,932	-		Sama_2970	0.56	+0.7
3,536,932	-		Sama_2970	0.56	-0.4
3,536,932	-		Sama_2970	0.56	-0.1
3,536,932	-		Sama_2970	0.56	-0.6
3,536,957	+		Sama_2970	0.57	+1.1
3,537,058	+		Sama_2970	0.63	+0.2
3,537,058	+		Sama_2970	0.63	+0.3
3,537,058	+		Sama_2970	0.63	-1.1
3,537,058	+		Sama_2970	0.63	-0.7
3,537,058	+		Sama_2970	0.63	-1.1
3,537,058	+		Sama_2970	0.63	+0.9
3,537,059	-		Sama_2970	0.63	+0.2
3,537,060	+		Sama_2970	0.63	+0.6
3,537,060	+		Sama_2970	0.63	-0.7
3,537,060	+		Sama_2970	0.63	-0.1
3,537,082	+		Sama_2970	0.65	-0.2
3,537,083	-		Sama_2970	0.65	-1.9
3,537,083	-		Sama_2970	0.65	+0.2
3,537,099	-		Sama_2970	0.66	+0.3
3,537,099	-		Sama_2970	0.66	-0.1
3,537,099	-		Sama_2970	0.66	+0.3
3,537,213	+		Sama_2970	0.73	+0.4
3,537,300	-		Sama_2970	0.78	-1.5
3,537,300	-		Sama_2970	0.78	-0.1
3,537,300	-		Sama_2970	0.78	+0.1
3,537,359	+		Sama_2970	0.81	+0.1
3,537,359	+		Sama_2970	0.81	+0.7
3,537,359	+		Sama_2970	0.81	+0.1
3,537,360	-		Sama_2970	0.81	+0.5
3,537,360	-		Sama_2970	0.81	+0.1
3,537,383	+		Sama_2970	0.83	-0.6
3,537,383	+		Sama_2970	0.83	+0.2
3,537,383	+		Sama_2970	0.83	-0.1
3,537,383	+		Sama_2970	0.83	-0.2
3,537,384	-		Sama_2970	0.83	+0.4
3,537,384	-		Sama_2970	0.83	-0.7
3,537,384	-		Sama_2970	0.83	-0.9
3,537,384	-		Sama_2970	0.83	-0.1
3,537,384	-		Sama_2970	0.83	+0.1
3,537,384	-		Sama_2970	0.83	-1.1
3,537,384	-		Sama_2970	0.83	-0.2
3,537,384	-		Sama_2970	0.83	+1.1
3,537,384	-		Sama_2970	0.83	+1.1
3,537,389	-		Sama_2970	0.83	+0.4
3,537,481	-		Sama_2970	0.89	-0.8
3,537,492	+		Sama_2970	0.89	-0.8
3,537,502	-		Sama_2970	0.90	+0.5
3,537,504	+		Sama_2970	0.90	+0.1
3,537,543	+				-1.3
3,537,600	+				+0.9
3,537,601	-				-0.2
3,537,628	+				-1.9
3,537,628	+				-0.7
3,537,628	+				-0.1
3,537,628	+				-1.3
3,537,628	+				-0.6
3,537,629	-				+0.8
3,537,629	-				-0.5
3,537,629	-				+0.3
3,537,629	-				+0.8
3,537,629	-				+0.3
3,537,629	-				+0.5
3,537,629	-				-0.2
3,537,670	+				-0.1
3,537,689	-				+0.5
3,537,777	+				-0.6
3,537,883	+				-0.8
3,537,883	+				-3.6
3,538,021	-		Sama_2971	0.12	-2.3
3,538,021	-		Sama_2971	0.12	+0.1
3,538,071	-		Sama_2971	0.14	-2.1
3,538,139	+		Sama_2971	0.17	-1.5
3,538,139	+		Sama_2971	0.17	-2.3
3,538,140	-		Sama_2971	0.17	-1.3
3,538,140	-		Sama_2971	0.17	-2.4
3,538,168	+		Sama_2971	0.18	-0.5
3,538,168	+		Sama_2971	0.18	-0.2
3,538,168	+		Sama_2971	0.18	-2.5
3,538,168	+		Sama_2971	0.18	-1.1
3,538,169	-		Sama_2971	0.18	-1.9
3,538,180	+		Sama_2971	0.19	-1.4
3,538,181	-		Sama_2971	0.19	-0.4
3,538,272	+		Sama_2971	0.22	+0.1
3,538,272	+		Sama_2971	0.22	+0.3
3,538,272	+		Sama_2971	0.22	-0.8
3,538,373	+		Sama_2971	0.27	-0.3
3,538,373	+		Sama_2971	0.27	-2.1
3,538,412	+		Sama_2971	0.28	-1.9
3,538,412	+		Sama_2971	0.28	-2.1
3,538,412	+		Sama_2971	0.28	-1.1
3,538,413	-		Sama_2971	0.28	-1.9
3,538,413	-		Sama_2971	0.28	-0.9
3,538,474	+		Sama_2971	0.31	-1.3
3,538,474	+		Sama_2971	0.31	-2.9
3,538,474	+		Sama_2971	0.31	+0.1
3,538,474	+		Sama_2971	0.31	-2.5
3,538,475	-		Sama_2971	0.31	-1.5
3,538,475	-		Sama_2971	0.31	-1.9
3,538,475	-		Sama_2971	0.31	-1.9
3,538,475	-		Sama_2971	0.31	-1.1
3,538,519	+		Sama_2971	0.33	-1.0
3,538,519	+		Sama_2971	0.33	-2.3
3,538,519	+		Sama_2971	0.33	-1.0
3,538,520	-		Sama_2971	0.33	-2.3
3,538,520	-		Sama_2971	0.33	-2.4
3,538,597	+		Sama_2971	0.36	-1.8
3,538,597	+		Sama_2971	0.36	-1.7
3,538,597	+		Sama_2971	0.36	-1.6
3,538,597	+		Sama_2971	0.36	-1.3
3,538,597	+		Sama_2971	0.36	-0.1
3,538,598	-		Sama_2971	0.36	-1.9
3,538,598	-		Sama_2971	0.36	-1.5
3,538,598	-		Sama_2971	0.36	-1.8
3,538,598	-		Sama_2971	0.36	-3.0
3,538,622	+		Sama_2971	0.37	-1.8
3,538,622	+		Sama_2971	0.37	-0.9
3,538,623	-		Sama_2971	0.37	-1.5
3,538,623	-		Sama_2971	0.37	-0.9
3,538,623	-		Sama_2971	0.37	-1.9
3,538,623	-		Sama_2971	0.37	-1.5
3,538,624	+		Sama_2971	0.37	-1.6
3,538,624	+		Sama_2971	0.37	+0.1
3,538,624	+		Sama_2971	0.37	-1.5
3,538,624	+		Sama_2971	0.37	-1.4
3,538,624	+		Sama_2971	0.37	-0.5
3,538,624	+		Sama_2971	0.37	-0.5
3,538,624	+		Sama_2971	0.37	-1.1
3,538,624	+		Sama_2971	0.37	-0.3
3,538,624	+		Sama_2971	0.37	-0.1
3,538,625	-		Sama_2971	0.38	-1.5
3,538,625	-		Sama_2971	0.38	-0.3
3,538,625	-		Sama_2971	0.38	-0.9
3,538,625	-		Sama_2971	0.38	-1.3
3,538,650	+		Sama_2971	0.39	-0.5
3,538,650	+		Sama_2971	0.39	-2.0
3,538,651	-		Sama_2971	0.39	-0.9