Strain Fitness in Shewanella amazonensis SB2B around Sama_2915

Experiment: D-Cellobiose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose
3,463,548	-		Sama_2913	0.80	-0.1
3,463,548	-		Sama_2913	0.80	-0.4
3,463,605	+		Sama_2913	0.84	+0.5
3,463,644	+		Sama_2913	0.86	+0.1
3,463,645	-		Sama_2913	0.86	-0.2
3,463,663	+		Sama_2913	0.88	+0.7
3,463,663	+		Sama_2913	0.88	+0.1
3,463,663	+		Sama_2913	0.88	-0.4
3,463,663	+		Sama_2913	0.88	-0.2
3,463,663	+		Sama_2913	0.88	+0.4
3,463,663	+		Sama_2913	0.88	-0.3
3,463,663	+		Sama_2913	0.88	-0.4
3,463,664	-		Sama_2913	0.88	+0.9
3,463,664	-		Sama_2913	0.88	-2.0
3,463,664	-		Sama_2913	0.88	-0.8
3,463,664	-		Sama_2913	0.88	-1.0
3,463,664	-		Sama_2913	0.88	-1.1
3,463,750	-				+0.1
3,463,775	-				+0.4
3,463,775	-				+0.4
3,463,833	+				-0.6
3,463,833	+				+0.5
3,463,834	-				+0.4
3,463,834	-				-1.1
3,463,834	-				+0.0
3,463,834	-				-0.2
3,464,039	+		Sama_2914	0.34	+1.2
3,464,040	-		Sama_2914	0.34	+0.4
3,464,040	-		Sama_2914	0.34	+1.4
3,464,040	-		Sama_2914	0.34	+0.2
3,464,040	-		Sama_2914	0.34	+0.1
3,464,063	+		Sama_2914	0.38	-2.3
3,464,063	+		Sama_2914	0.38	+0.5
3,464,063	+		Sama_2914	0.38	-0.0
3,464,063	+		Sama_2914	0.38	+0.2
3,464,063	+		Sama_2914	0.38	+0.2
3,464,063	+		Sama_2914	0.38	+0.3
3,464,064	-		Sama_2914	0.38	-0.4
3,464,064	-		Sama_2914	0.38	-1.0
3,464,064	-		Sama_2914	0.38	+0.6
3,464,064	-		Sama_2914	0.38	+0.1
3,464,064	-		Sama_2914	0.38	+0.3
3,464,168	+		Sama_2914	0.57	+0.2
3,464,168	+		Sama_2914	0.57	+0.2
3,464,168	+		Sama_2914	0.57	-0.1
3,464,168	+		Sama_2914	0.57	+0.0
3,464,168	+		Sama_2914	0.57	-1.3
3,464,168	+		Sama_2914	0.57	+0.7
3,464,168	+		Sama_2914	0.57	+0.5
3,464,168	+		Sama_2914	0.57	+0.4
3,464,169	-		Sama_2914	0.57	-1.0
3,464,169	-		Sama_2914	0.57	+0.0
3,464,169	-		Sama_2914	0.57	-0.5
3,464,169	-		Sama_2914	0.57	-0.0
3,464,169	-		Sama_2914	0.57	+0.2
3,464,169	-		Sama_2914	0.57	+0.6
3,464,169	-		Sama_2914	0.57	+0.3
3,464,182	+		Sama_2914	0.60	+0.3
3,464,184	+		Sama_2914	0.60	-0.7
3,464,184	+		Sama_2914	0.60	-0.7
3,464,185	-		Sama_2914	0.60	-0.8
3,464,185	-		Sama_2914	0.60	-0.8
3,464,185	-		Sama_2914	0.60	-0.4
3,464,185	-		Sama_2914	0.60	+0.1
3,464,185	-		Sama_2914	0.60	-0.4
3,464,185	-		Sama_2914	0.60	-0.9
3,464,193	+		Sama_2914	0.62	-1.1
3,464,193	+		Sama_2914	0.62	-0.2
3,464,193	+		Sama_2914	0.62	+0.0
3,464,193	+		Sama_2914	0.62	-0.1
3,464,193	+		Sama_2914	0.62	-0.4
3,464,194	-		Sama_2914	0.62	-0.2
3,464,194	-		Sama_2914	0.62	+0.3
3,464,217	-		Sama_2914	0.66	+0.2
3,464,298	-		Sama_2914	0.81	-0.4
3,464,298	-		Sama_2914	0.81	+0.5
3,464,305	+		Sama_2914	0.83	-0.2
3,464,335	+		Sama_2914	0.88	+0.5
3,464,335	+		Sama_2914	0.88	-1.0
3,464,335	+		Sama_2914	0.88	-0.3
3,464,338	+		Sama_2914	0.89	-1.3
3,464,339	-		Sama_2914	0.89	+0.0
3,464,397	+				+1.4
3,464,398	-				+0.2
3,464,398	-				-0.2
3,464,401	+				+0.3
3,464,401	+				+1.3
3,464,402	-				+0.9
3,464,402	-				+0.4
3,464,402	-				+0.3
3,464,418	-				-0.2
3,464,436	+				-0.5
3,464,436	+				-0.7
3,464,437	-				+0.7
3,464,437	-				-1.0
3,464,445	+				-0.7
3,464,487	-				-0.7
3,464,494	-				-1.2
3,464,494	-				-0.4
3,464,494	-				+0.6
3,464,516	-				-0.7
3,464,516	-				+0.4
3,464,516	-				+0.1
3,464,516	-				-0.4
3,464,519	+				+0.3
3,464,519	+				-0.8
3,464,520	-				-1.0
3,464,520	-				-1.3
3,464,538	-				-0.4
3,464,538	-				-1.6
3,464,538	-				-0.3
3,464,542	+				-0.1
3,464,542	+				-0.5
3,464,542	+				+0.2
3,464,542	+				+1.8
3,464,542	+				+0.8
3,464,542	+				+0.3
3,464,542	+				+1.3
3,464,542	+				+1.3
3,464,543	-				+0.1
3,464,543	-				+0.2
3,464,543	-				+1.0
3,464,543	-				-0.7
3,464,543	-				+0.2
3,464,546	-				+0.2
3,464,634	+		Sama_2915	0.14	-0.2
3,464,635	-		Sama_2915	0.14	+0.5
3,464,672	+		Sama_2915	0.18	+0.1
3,464,673	-		Sama_2915	0.18	-0.4
3,464,674	+		Sama_2915	0.19	-0.4
3,464,674	+		Sama_2915	0.19	-0.3
3,464,674	+		Sama_2915	0.19	+0.6
3,464,674	+		Sama_2915	0.19	+0.0
3,464,674	+		Sama_2915	0.19	-0.8
3,464,674	+		Sama_2915	0.19	+0.1
3,464,675	-		Sama_2915	0.19	-1.1
3,464,675	-		Sama_2915	0.19	+0.6
3,464,675	-		Sama_2915	0.19	+1.3
3,464,675	-		Sama_2915	0.19	-2.0
3,464,675	-		Sama_2915	0.19	-1.0
3,464,675	-		Sama_2915	0.19	+0.4
3,464,675	-		Sama_2915	0.19	+0.2
3,464,706	+		Sama_2915	0.23	+0.0
3,464,706	+		Sama_2915	0.23	-1.3
3,464,707	-		Sama_2915	0.23	+0.4
3,464,707	-		Sama_2915	0.23	+0.2
3,464,707	-		Sama_2915	0.23	-2.2
3,464,721	+		Sama_2915	0.24	-0.2
3,464,721	+		Sama_2915	0.24	+0.9
3,464,721	+		Sama_2915	0.24	+0.8
3,464,721	+		Sama_2915	0.24	-0.3
3,464,721	+		Sama_2915	0.24	-0.2
3,464,722	-		Sama_2915	0.24	+0.0
3,464,722	-		Sama_2915	0.24	+0.5
3,464,722	-		Sama_2915	0.24	+0.0
3,464,762	+		Sama_2915	0.29	-1.3
3,464,763	-		Sama_2915	0.30	-0.1
3,464,763	-		Sama_2915	0.30	-0.6
3,464,795	+		Sama_2915	0.33	+0.5
3,464,795	+		Sama_2915	0.33	+1.5
3,464,795	+		Sama_2915	0.33	-0.2
3,464,796	-		Sama_2915	0.34	-1.3
3,464,815	-		Sama_2915	0.36	-0.1
3,464,815	-		Sama_2915	0.36	+0.2
3,464,840	+		Sama_2915	0.39	+0.3
3,464,840	+		Sama_2915	0.39	-0.1
3,464,850	-		Sama_2915	0.40	-2.3
3,464,982	+		Sama_2915	0.56	+1.0
3,464,982	+		Sama_2915	0.56	+0.6
3,464,982	+		Sama_2915	0.56	-0.3
3,464,982	+		Sama_2915	0.56	+0.5
3,464,983	-		Sama_2915	0.57	+0.0
3,464,983	-		Sama_2915	0.57	+1.0
3,465,017	+		Sama_2915	0.61	-1.7
3,465,017	+		Sama_2915	0.61	+1.5
3,465,017	+		Sama_2915	0.61	+0.4
3,465,018	-		Sama_2915	0.61	-0.8
3,465,046	+		Sama_2915	0.64	-0.0
3,465,046	+		Sama_2915	0.64	-1.5
3,465,046	+		Sama_2915	0.64	+1.3
3,465,046	+		Sama_2915	0.64	+0.5
3,465,046	+		Sama_2915	0.64	-0.5
3,465,047	-		Sama_2915	0.64	-0.1
3,465,062	+		Sama_2915	0.66	+0.3
3,465,063	-		Sama_2915	0.66	-0.9
3,465,073	-		Sama_2915	0.68	+0.7
3,465,076	-		Sama_2915	0.68	+0.3
3,465,076	-		Sama_2915	0.68	+0.1
3,465,157	-		Sama_2915	0.78	-0.4
3,465,255	+				+0.3
3,465,255	+				-1.0
3,465,256	-				+0.0
3,465,298	+				+1.0
3,465,346	+				-0.6
3,465,346	+				-0.9
3,465,347	-				-0.6
3,465,347	-				-0.2
3,465,358	+				+0.2
3,465,358	+				+0.9
3,465,358	+				-0.2
3,465,358	+				+0.4
3,465,358	+				+0.6
3,465,419	-				+0.1
3,465,458	+				+0.6
3,465,459	-				-0.8
3,465,513	-				-0.5
3,465,712	+		Sama_2916	0.28	+0.5
3,465,740	+		Sama_2916	0.31	-0.8
3,465,740	+		Sama_2916	0.31	-0.1
3,465,740	+		Sama_2916	0.31	+0.2
3,465,740	+		Sama_2916	0.31	+1.6
3,465,740	+		Sama_2916	0.31	+0.8
3,465,740	+		Sama_2916	0.31	+1.0
3,465,740	+		Sama_2916	0.31	+0.3
3,465,740	+		Sama_2916	0.31	-0.8
3,465,741	-		Sama_2916	0.31	+0.3
3,465,750	+		Sama_2916	0.32	+0.1
3,465,750	+		Sama_2916	0.32	-2.0
3,465,750	+		Sama_2916	0.32	-0.1
3,465,750	+		Sama_2916	0.32	+0.5
3,465,750	+		Sama_2916	0.32	+0.8
3,465,751	-		Sama_2916	0.32	+0.2
3,465,751	-		Sama_2916	0.32	+0.4
3,465,751	-		Sama_2916	0.32	-1.6
3,465,751	-		Sama_2916	0.32	+0.3
3,465,878	+		Sama_2916	0.47	-0.1
3,465,909	+		Sama_2916	0.50	-0.2
3,465,909	+		Sama_2916	0.50	-0.4
3,465,909	+		Sama_2916	0.50	-1.0
3,465,910	-		Sama_2916	0.50	+0.0
3,465,910	-		Sama_2916	0.50	-0.6
3,465,910	-		Sama_2916	0.50	-0.9
3,465,910	-		Sama_2916	0.50	-0.2
3,465,910	-		Sama_2916	0.50	+1.0
3,465,933	+		Sama_2916	0.53	+0.2
3,465,933	+		Sama_2916	0.53	-0.7
3,465,934	-		Sama_2916	0.53	+0.3
3,465,934	-		Sama_2916	0.53	+0.6
3,465,944	+		Sama_2916	0.54	+0.7
3,465,944	+		Sama_2916	0.54	+0.5
3,465,945	-		Sama_2916	0.54	+0.4
3,465,957	-		Sama_2916	0.55	-0.1
3,465,957	-		Sama_2916	0.55	+0.5
3,466,000	+		Sama_2916	0.60	+0.5
3,466,000	+		Sama_2916	0.60	-0.5
3,466,111	+		Sama_2916	0.73	-0.5
3,466,177	-		Sama_2916	0.80	+0.2
3,466,177	-		Sama_2916	0.80	+0.3
3,466,198	+		Sama_2916	0.82	-1.2
3,466,198	+		Sama_2916	0.82	+0.3
3,466,199	-		Sama_2916	0.82	-1.6
3,466,199	-		Sama_2916	0.82	+0.5
3,466,199	-		Sama_2916	0.82	-0.2
3,466,209	+		Sama_2916	0.84	+0.9
3,466,221	-		Sama_2916	0.85	+0.5
3,466,241	+		Sama_2916	0.87	-0.9
3,466,241	+		Sama_2916	0.87	+0.0
3,466,241	+		Sama_2916	0.87	+0.8
3,466,241	+		Sama_2916	0.87	+0.6
3,466,241	+		Sama_2916	0.87	+0.2
3,466,241	+		Sama_2916	0.87	+0.1
3,466,241	+		Sama_2916	0.87	+0.0
3,466,242	-		Sama_2916	0.87	+0.6
3,466,242	-		Sama_2916	0.87	-0.2
3,466,242	-		Sama_2916	0.87	+0.3