Strain Fitness in Shewanella loihica PV-4 around Shew_3717

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
4,423,174	+		Shew_3716	0.69	+0.2
4,423,391	+				-0.1
4,423,491	+				+1.4
4,423,502	+				+1.6
4,423,502	+				+0.1
4,423,510	-				+1.1
4,423,656	+				+2.0
4,423,664	-				+1.9
4,423,664	-				+1.6
4,423,675	+				+1.5
4,423,675	+				+1.9
4,423,683	-				+1.3
4,423,683	-				+1.7
4,423,683	-				+1.8
4,423,683	-				+2.8
4,423,699	-				+1.5
4,423,732	+				+2.7
4,423,732	+				+1.5
4,423,732	+				+0.8
4,423,734	+				+1.7
4,423,740	-				+1.8
4,423,740	-				+1.7
4,423,740	-				+3.9
4,423,740	-				+1.9
4,423,742	+				+2.3
4,423,747	+				+1.8
4,423,750	-				+1.9
4,423,750	-				+2.1
4,423,750	-				+3.1
4,423,750	-				+2.2
4,423,750	-				+1.5
4,423,755	-				+2.1
4,423,773	+				+1.8
4,423,823	+				+0.0
4,423,856	+				+1.2
4,423,864	-				+1.2
4,423,960	-				+2.3
4,424,019	+				+2.1
4,424,116	+				-2.1
4,424,145	+				+1.8
4,424,473	+		Shew_3717	0.50	+0.7
4,424,492	-		Shew_3717	0.53	+0.3
4,424,562	+		Shew_3717	0.63	+0.5
4,424,603	+		Shew_3717	0.69	+0.3
4,424,603	+		Shew_3717	0.69	+0.6
4,424,611	-		Shew_3717	0.70	+1.9
4,424,611	-		Shew_3717	0.70	+0.2
4,424,672	+		Shew_3717	0.80	-0.2
4,424,813	+				-1.9
4,425,098	+		Shew_3718	0.45	-0.1
4,425,495	+				+0.3
4,425,520	+				+0.6
4,425,670	+		Shew_3719	0.40	-0.8
4,425,744	+		Shew_3719	0.56	+0.7
4,425,747	-		Shew_3719	0.56	+0.8