Strain Fitness in Shewanella loihica PV-4 around Shew_3534

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
4,221,066	+		Shew_3533	0.53	+0.6
4,221,122	-		Shew_3533	0.60	-0.5
4,221,143	+		Shew_3533	0.63	-0.8
4,221,232	+		Shew_3533	0.74	-0.1
4,221,393	+				+0.4
4,221,427	+				+0.0
4,221,559	-				-0.7
4,221,701	-				+0.1
4,221,960	-				-0.2
4,222,373	-		Shew_3534	0.18	+0.9
4,222,420	-		Shew_3534	0.19	-0.1
4,222,479	-		Shew_3534	0.21	-0.9
4,222,802	+		Shew_3534	0.31	-0.0
4,222,932	-		Shew_3534	0.35	+0.5
4,223,262	+		Shew_3534	0.46	-1.5
4,223,273	+		Shew_3534	0.46	-0.3
4,223,337	+		Shew_3534	0.48	-0.4
4,223,371	+		Shew_3534	0.49	+0.3
4,223,469	+		Shew_3534	0.53	-1.0
4,223,477	-		Shew_3534	0.53	+0.0
4,223,748	+		Shew_3534	0.61	+0.4
4,223,852	-		Shew_3534	0.65	-0.5
4,223,978	-		Shew_3534	0.69	-0.7
4,224,020	+		Shew_3534	0.70	-1.3
4,224,028	-		Shew_3534	0.70	+0.5
4,224,038	-		Shew_3534	0.71	-1.0
4,224,051	+		Shew_3534	0.71	-2.0
4,224,077	+		Shew_3534	0.72	-0.1
4,224,202	-		Shew_3534	0.76	-0.7
4,224,270	+		Shew_3534	0.78	+0.5
4,224,325	-		Shew_3534	0.80	-1.0
4,224,408	+		Shew_3534	0.82	-0.8
4,224,462	-		Shew_3534	0.84	+0.1
4,224,544	+		Shew_3534	0.87	-1.3
4,224,709	+				+0.3
4,225,170	+		Shew_3535	0.13	+0.2
4,225,255	+		Shew_3535	0.18	-0.4
4,225,301	+		Shew_3535	0.21	+0.1
4,225,309	-		Shew_3535	0.21	+0.1
4,225,315	-		Shew_3535	0.22	+0.6