Strain Fitness in Shewanella loihica PV-4 around Shew_3494

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
4,179,147	+		Shew_3493	0.36	+0.1
4,179,149	+		Shew_3493	0.36	-1.0
4,179,268	+		Shew_3493	0.46	-0.9
4,179,438	+		Shew_3493	0.59	+0.2
4,179,446	-		Shew_3493	0.59	+0.4
4,179,446	-		Shew_3493	0.59	-0.1
4,179,829	-		Shew_3493	0.89	-2.6
4,179,849	-				-0.3
4,179,871	+				-0.7
4,179,945	+				-1.0
4,179,945	+				+0.6
4,179,945	+				+0.5
4,179,953	-				-0.2
4,180,168	-				-0.1
4,180,168	-				+0.2
4,180,190	+				+0.1
4,180,226	+				+0.4
4,180,460	-		Shew_3494	0.29	-0.1
4,180,630	-		Shew_3494	0.45	+0.9
4,180,631	-		Shew_3494	0.45	+1.4
4,180,863	+		Shew_3494	0.67	+0.3
4,180,871	-		Shew_3494	0.68	+2.1
4,180,871	-		Shew_3494	0.68	+0.6
4,180,903	+		Shew_3494	0.71	+0.3
4,180,975	-		Shew_3494	0.78	+0.4
4,181,038	-		Shew_3494	0.84	-0.9
4,181,042	+		Shew_3494	0.84	+0.7
4,181,754	+		Shew_3495	0.58	-0.1
4,182,129	+				-0.4