Strain Fitness in Shewanella loihica PV-4 around Shew_3472

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
4,155,453	+		Shew_3471	0.23	+0.7
4,155,461	-		Shew_3471	0.24	-0.2
4,155,461	-		Shew_3471	0.24	-0.5
4,155,461	-		Shew_3471	0.24	-0.2
4,155,461	-		Shew_3471	0.24	+0.4
4,155,471	-		Shew_3471	0.25	-0.4
4,155,487	-		Shew_3471	0.26	+0.5
4,155,688	+		Shew_3471	0.45	+0.2
4,155,701	-		Shew_3471	0.46	-0.1
4,155,715	+		Shew_3471	0.47	+1.0
4,155,809	+		Shew_3471	0.56	+0.2
4,155,831	+		Shew_3471	0.58	+1.2
4,155,864	-		Shew_3471	0.61	+0.6
4,155,905	+		Shew_3471	0.65	+1.5
4,155,906	-		Shew_3471	0.65	-0.6
4,155,962	-		Shew_3471	0.70	+0.1
4,156,025	-		Shew_3471	0.76	+1.1
4,156,065	-		Shew_3471	0.79	+0.5
4,156,293	+				-0.1
4,156,366	+				-0.2
4,156,527	-		Shew_3472	0.11	-0.3
4,156,607	-		Shew_3472	0.17	+0.4
4,156,701	-		Shew_3472	0.23	+0.8
4,156,796	+		Shew_3472	0.29	-0.2
4,156,804	-		Shew_3472	0.29	-0.5
4,156,804	-		Shew_3472	0.29	-1.2
4,157,012	-		Shew_3472	0.42	+0.1
4,157,105	+		Shew_3472	0.48	-0.1
4,157,118	+		Shew_3472	0.49	+0.1
4,157,190	+		Shew_3472	0.54	-0.0
4,157,303	-		Shew_3472	0.61	-0.2
4,157,567	-		Shew_3472	0.78	-0.4
4,157,595	-		Shew_3472	0.79	-0.4
4,157,595	-		Shew_3472	0.79	+0.4
4,157,618	+		Shew_3472	0.81	-0.1
4,157,618	+		Shew_3472	0.81	+0.4
4,157,658	+		Shew_3472	0.83	+0.8
4,157,702	+		Shew_3472	0.86	+0.7
4,157,739	+		Shew_3472	0.89	+0.9
4,157,739	+		Shew_3472	0.89	-1.1
4,157,786	+				+0.2
4,157,846	+				-0.2
4,158,039	+				-0.3
4,158,047	-				+0.4
4,158,172	+				-0.6
4,158,226	-				-0.1
4,158,226	-				+0.3
4,158,504	-				-0.3
4,158,631	+		Shew_3473	0.11	+1.0
4,158,708	-		Shew_3473	0.15	+1.4
4,158,735	+		Shew_3473	0.17	+1.2
4,158,853	-		Shew_3473	0.24	+1.4
4,158,864	+		Shew_3473	0.24	+1.7
4,158,902	+		Shew_3473	0.27	+1.8
4,158,910	-		Shew_3473	0.27	+1.2