Strain Fitness in Shewanella loihica PV-4 around Shew_3470

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
4,153,036	-				+0.3
4,153,171	-				+0.0
4,153,171	-				+0.3
4,153,615	+		Shew_3469	0.71	+0.1
4,153,706	+		Shew_3469	0.86	+0.6
4,153,719	-		Shew_3469	0.89	+0.1
4,153,768	-				-0.4
4,153,861	-				-1.1
4,154,216	+		Shew_3470	0.30	+0.5
4,154,226	+		Shew_3470	0.31	+0.2
4,154,307	+		Shew_3470	0.36	+0.1
4,154,545	+		Shew_3470	0.53	+0.5
4,154,624	-		Shew_3470	0.59	+0.2
4,154,726	+		Shew_3470	0.66	-0.5
4,154,734	-		Shew_3470	0.67	+0.1
4,154,734	-		Shew_3470	0.67	-0.5
4,154,734	-		Shew_3470	0.67	-0.2
4,154,825	+		Shew_3470	0.73	-1.1
4,155,228	-				+0.1
4,155,453	+		Shew_3471	0.23	+0.7
4,155,461	-		Shew_3471	0.24	-0.2
4,155,461	-		Shew_3471	0.24	-0.5
4,155,461	-		Shew_3471	0.24	-0.2
4,155,461	-		Shew_3471	0.24	+0.4
4,155,471	-		Shew_3471	0.25	-0.4
4,155,487	-		Shew_3471	0.26	+0.5
4,155,688	+		Shew_3471	0.45	+0.2
4,155,701	-		Shew_3471	0.46	-0.1
4,155,715	+		Shew_3471	0.47	+1.0
4,155,809	+		Shew_3471	0.56	+0.2
4,155,831	+		Shew_3471	0.58	+1.2
4,155,864	-		Shew_3471	0.61	+0.6
4,155,905	+		Shew_3471	0.65	+1.5
4,155,906	-		Shew_3471	0.65	-0.6
4,155,962	-		Shew_3471	0.70	+0.1
4,156,025	-		Shew_3471	0.76	+1.1
4,156,065	-		Shew_3471	0.79	+0.5