Strain Fitness in Shewanella loihica PV-4 around Shew_3018

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
3,583,257	+		Shew_3017	0.36	-0.7
3,583,382	-		Shew_3017	0.45	+0.6
3,583,400	+		Shew_3017	0.47	+0.1
3,583,508	+		Shew_3017	0.55	-1.2
3,583,631	+		Shew_3017	0.64	-0.3
3,584,138	+				+0.5
3,584,400	-		Shew_3018	0.30	-0.2
3,584,490	+		Shew_3018	0.42	-1.0
3,584,521	-		Shew_3018	0.46	-0.2
3,584,595	-		Shew_3018	0.55	-1.3
3,584,801	-		Shew_3018	0.81	-0.2
3,584,925	-				+0.1
3,585,057	-		Shew_3019	0.11	-0.1
3,585,194	-		Shew_3019	0.24	-0.6
3,585,194	-		Shew_3019	0.24	-0.3
3,585,338	+		Shew_3019	0.38	+0.0
3,585,374	-		Shew_3019	0.42	-0.2
3,585,434	+		Shew_3019	0.48	-0.5
3,585,668	+		Shew_3019	0.71	+0.1