Strain Fitness in Shewanella loihica PV-4 around Shew_2945

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
3,489,964	-				+0.3
3,490,116	-				-0.2
3,490,273	+		Shew_2945	0.16	-1.0
3,490,273	+		Shew_2945	0.16	+0.5
3,490,281	-		Shew_2945	0.17	-0.1
3,490,339	-		Shew_2945	0.24	+1.2
3,490,470	-		Shew_2945	0.40	-0.1
3,490,666	+		Shew_2945	0.63	+0.6
3,490,726	-		Shew_2945	0.70	+0.8
3,490,981	+				-0.3
3,490,982	-				-0.5
3,491,077	-				+0.5
3,491,077	-				+0.7
3,491,089	-				-0.3
3,491,134	+				-0.3
3,491,156	-		Shew_2946	0.13	-0.8
3,491,294	+		Shew_2946	0.44	-0.3
3,491,328	-		Shew_2946	0.51	-2.2
3,491,379	+		Shew_2946	0.62	-0.2
3,491,382	-		Shew_2946	0.63	-0.2
3,491,387	-		Shew_2946	0.64	-0.6
3,491,515	-				+0.0
3,491,943	+		Shew_2947	0.76	+0.1
3,491,956	+		Shew_2947	0.81	+0.2