Strain Fitness in Shewanella loihica PV-4 around Shew_1878

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
2,162,411	+				+0.2
2,162,603	+		Shew_1877	0.13	+0.3
2,162,936	-				+1.0
2,163,102	+				-0.1
2,163,148	-				+0.5
2,163,169	+				-0.2
2,163,189	+		Shew_1878	0.11	+0.4
2,163,669	-		Shew_1878	0.55	+3.2
2,163,769	-		Shew_1878	0.64	+0.2
2,164,063	+				-0.3
2,164,063	+				+0.2
2,164,071	-				-0.1
2,164,733	+				+1.8
2,164,944	-		Shew_1880	0.35	-0.3