Strain Fitness in Shewanella loihica PV-4 around Shew_1091

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
1,256,139	+		Shew_1090	0.85	-1.1
1,256,153	+		Shew_1090	0.87	-1.1
1,256,163	+		Shew_1090	0.88	+0.3
1,256,405	+				+0.3
1,256,405	+				-1.7
1,256,737	+				-0.0
1,256,893	-		Shew_1091	0.15	-0.4
1,257,024	-		Shew_1091	0.20	+1.8
1,257,176	+		Shew_1091	0.27	+1.0
1,257,210	-		Shew_1091	0.28	+0.3
1,257,673	+		Shew_1091	0.48	+0.1
1,257,718	-		Shew_1091	0.49	+1.0
1,257,724	-		Shew_1091	0.50	-0.1
1,257,724	-		Shew_1091	0.50	+0.3
1,257,791	-		Shew_1091	0.53	-1.2
1,257,959	+		Shew_1091	0.60	-1.0
1,258,127	+		Shew_1091	0.67	+0.6
1,258,437	+		Shew_1091	0.80	-0.7
1,258,437	+		Shew_1091	0.80	-0.3
1,258,437	+		Shew_1091	0.80	-0.0
1,258,447	+		Shew_1091	0.80	+0.2
1,258,838	-				+2.5
1,259,325	+				+0.9
1,259,850	-		Shew_1092	0.34	+1.9
1,259,855	-		Shew_1092	0.35	+1.3
1,259,898	-		Shew_1092	0.38	+1.2