Experiment: Cephalothin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt moaC and Shew_0090 are separated by 49 nucleotides Shew_0090 and Shew_0091 are separated by 1 nucleotides Shew_0091 and Shew_0092 are separated by 33 nucleotides Shew_0092 and Shew_0093 overlap by 1 nucleotides Shew_0093 and Shew_0094 overlap by 20 nucleotides
Shew_0089: moaC - molybdenum cofactor biosynthesis protein C (RefSeq), at 103,204 to 103,680
moaC
Shew_0090: Shew_0090 - molybdopterin converting factor, subunit 1 (RefSeq), at 103,730 to 103,981
_0090
Shew_0091: Shew_0091 - molybdopterin biosynthesis MoaE (RefSeq), at 103,983 to 104,450
_0091
Shew_0092: Shew_0092 - molybdenum ABC transporter, periplasmic molybdate-binding protein (RefSeq), at 104,484 to 105,308
_0092
Shew_0093: Shew_0093 - molybdate ABC transporter, inner membrane subunit (RefSeq), at 105,308 to 105,988
_0093
Shew_0094: Shew_0094 - ABC transporter-related protein (RefSeq), at 105,969 to 107,078
_0094
Position (kb) 104
105
106 Strain fitness (log2 ratio) -1
0
1
2 at 103.601 kb on - strand, within moaC at 104.069 kb on - strand, within Shew_0091 at 104.211 kb on + strand, within Shew_0091 at 104.219 kb on - strand, within Shew_0091 at 104.505 kb on + strand at 104.513 kb on - strand at 104.535 kb on + strand at 104.538 kb on - strand at 104.863 kb on + strand, within Shew_0092 at 105.010 kb on - strand, within Shew_0092 at 105.010 kb on - strand, within Shew_0092 at 105.105 kb on + strand, within Shew_0092 at 105.356 kb on - strand at 105.424 kb on + strand, within Shew_0093 at 105.442 kb on + strand, within Shew_0093 at 105.481 kb on - strand, within Shew_0093 at 105.505 kb on - strand, within Shew_0093 at 105.585 kb on + strand, within Shew_0093 at 105.593 kb on - strand, within Shew_0093 at 105.721 kb on - strand, within Shew_0093 at 105.765 kb on + strand, within Shew_0093 at 105.773 kb on - strand, within Shew_0093 at 105.934 kb on + strand at 106.087 kb on + strand, within Shew_0094 at 106.098 kb on + strand, within Shew_0094 at 106.137 kb on - strand, within Shew_0094 at 106.265 kb on + strand, within Shew_0094 at 106.303 kb on - strand, within Shew_0094
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.05 mg/ml remove 103,601 - moaC Shew_0089 0.83 -1.1 104,069 - Shew_0091 0.18 +0.5 104,211 + Shew_0091 0.49 +0.6 104,219 - Shew_0091 0.50 +1.4 104,505 + -0.0 104,513 - -0.6 104,535 + +0.1 104,538 - +0.0 104,863 + Shew_0092 0.46 +2.6 105,010 - Shew_0092 0.64 +0.2 105,010 - Shew_0092 0.64 +0.8 105,105 + Shew_0092 0.75 -0.0 105,356 - +1.2 105,424 + Shew_0093 0.17 +0.2 105,442 + Shew_0093 0.20 -1.2 105,481 - Shew_0093 0.25 -0.0 105,505 - Shew_0093 0.29 +0.7 105,585 + Shew_0093 0.41 -0.0 105,593 - Shew_0093 0.42 +0.0 105,721 - Shew_0093 0.61 -0.6 105,765 + Shew_0093 0.67 +0.0 105,773 - Shew_0093 0.68 +0.4 105,934 + -0.2 106,087 + Shew_0094 0.11 +0.0 106,098 + Shew_0094 0.12 -0.0 106,137 - Shew_0094 0.15 +0.2 106,265 + Shew_0094 0.27 -0.9 106,303 - Shew_0094 0.30 +0.3
Or see this region's nucleotide sequence