Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3482 and Dsui_3483 are separated by 20 nucleotides Dsui_3483 and Dsui_3484 are separated by 112 nucleotides Dsui_3484 and Dsui_3485 are separated by 74 nucleotides
Dsui_3482: Dsui_3482 - Na+/H+ dicarboxylate symporter, at 3,746,322 to 3,747,635
_3482
Dsui_3483: Dsui_3483 - putative membrane protein required for alginate biosynthesis, at 3,747,656 to 3,748,001
_3483
Dsui_3484: Dsui_3484 - putative permease, at 3,748,114 to 3,748,881
_3484
Dsui_3485: Dsui_3485 - signal transduction histidine kinase regulating C4-dicarboxylate transport system, at 3,748,956 to 3,750,836
_3485
Position (kb)
3748
3749 Strain fitness (log2 ratio)
-1
0
1 at 3747.245 kb on - strand, within Dsui_3482 at 3747.252 kb on + strand, within Dsui_3482 at 3747.259 kb on + strand, within Dsui_3482 at 3747.262 kb on - strand, within Dsui_3482 at 3747.612 kb on - strand at 3747.637 kb on - strand at 3747.667 kb on + strand at 3747.768 kb on + strand, within Dsui_3483 at 3747.816 kb on - strand, within Dsui_3483 at 3747.816 kb on - strand, within Dsui_3483 at 3747.872 kb on + strand, within Dsui_3483 at 3747.880 kb on - strand, within Dsui_3483 at 3747.886 kb on + strand, within Dsui_3483 at 3747.894 kb on - strand, within Dsui_3483 at 3747.899 kb on - strand, within Dsui_3483 at 3747.904 kb on + strand, within Dsui_3483 at 3747.912 kb on - strand, within Dsui_3483 at 3748.062 kb on - strand at 3748.238 kb on + strand, within Dsui_3484 at 3748.667 kb on + strand, within Dsui_3484 at 3748.713 kb on + strand, within Dsui_3484 at 3748.713 kb on + strand, within Dsui_3484 at 3748.989 kb on + strand at 3749.054 kb on + strand at 3749.158 kb on + strand, within Dsui_3485 at 3749.166 kb on - strand at 3749.166 kb on - strand at 3749.187 kb on - strand at 3749.222 kb on - strand, within Dsui_3485 at 3749.228 kb on + strand, within Dsui_3485 at 3749.388 kb on + strand, within Dsui_3485 at 3749.470 kb on - strand, within Dsui_3485 at 3749.495 kb on + strand, within Dsui_3485 at 3749.551 kb on - strand at 3749.640 kb on - strand, within Dsui_3485 at 3749.698 kb on + strand, within Dsui_3485 at 3749.744 kb on + strand, within Dsui_3485 at 3749.752 kb on - strand at 3749.833 kb on - strand, within Dsui_3485
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 3,747,245 - Dsui_3482 0.70 +0.2 3,747,252 + Dsui_3482 0.71 +0.0 3,747,259 + Dsui_3482 0.71 -0.1 3,747,262 - Dsui_3482 0.72 -0.2 3,747,612 - -0.2 3,747,637 - -0.1 3,747,667 + -0.5 3,747,768 + Dsui_3483 0.32 -0.7 3,747,816 - Dsui_3483 0.46 -0.2 3,747,816 - Dsui_3483 0.46 +0.9 3,747,872 + Dsui_3483 0.62 -0.1 3,747,880 - Dsui_3483 0.65 -0.2 3,747,886 + Dsui_3483 0.66 -0.0 3,747,894 - Dsui_3483 0.69 +0.3 3,747,899 - Dsui_3483 0.70 +1.0 3,747,904 + Dsui_3483 0.72 -0.3 3,747,912 - Dsui_3483 0.74 +0.3 3,748,062 - -0.2 3,748,238 + Dsui_3484 0.16 -1.3 3,748,667 + Dsui_3484 0.72 -1.2 3,748,713 + Dsui_3484 0.78 +1.1 3,748,713 + Dsui_3484 0.78 -0.3 3,748,989 + +0.1 3,749,054 + +0.8 3,749,158 + Dsui_3485 0.11 -0.1 3,749,166 - +1.3 3,749,166 - +1.2 3,749,187 - +1.7 3,749,222 - Dsui_3485 0.14 -0.6 3,749,228 + Dsui_3485 0.14 -0.5 3,749,388 + Dsui_3485 0.23 -0.5 3,749,470 - Dsui_3485 0.27 -0.0 3,749,495 + Dsui_3485 0.29 +0.6 3,749,551 - +0.7 3,749,640 - Dsui_3485 0.36 -0.3 3,749,698 + Dsui_3485 0.39 -0.9 3,749,744 + Dsui_3485 0.42 -1.2 3,749,752 - +1.7 3,749,833 - Dsui_3485 0.47 -1.3
Or see this region's nucleotide sequence