Strain Fitness in Dechlorosoma suillum PS around Dsui_3458
Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | rich media with hydrogen peroxide 5 mM |
---|---|---|---|---|---|
remove | |||||
3,720,235 | - | Dsui_3457 | 0.64 | -0.3 | |
3,721,072 | + | +0.7 | |||
3,721,173 | + | +1.7 | |||
3,721,181 | - | +0.1 | |||
3,721,233 | - | +0.1 | |||
3,721,502 | - | Dsui_3458 | 0.33 | -0.1 | |
3,721,636 | + | Dsui_3458 | 0.49 | +0.1 | |
3,721,770 | + | Dsui_3458 | 0.65 | -0.4 | |
3,721,827 | + | Dsui_3458 | 0.72 | +0.4 | |
3,721,874 | - | +0.7 | |||
3,721,967 | + | Dsui_3458 | 0.88 | +0.7 | |
3,722,050 | + | -0.1 | |||
3,722,057 | - | -1.9 | |||
3,722,057 | - | +0.7 | |||
3,722,083 | + | -0.3 | |||
3,722,083 | + | +0.6 | |||
3,722,083 | + | +0.1 | |||
3,722,083 | + | -0.2 | |||
3,722,091 | - | +1.7 | |||
3,722,091 | - | -0.7 | |||
3,722,184 | + | +0.1 | |||
3,722,186 | - | +1.1 | |||
3,722,192 | - | +0.7 | |||
3,722,241 | + | Dsui_3459 | 0.16 | -0.0 | |
3,722,241 | + | Dsui_3459 | 0.16 | +0.4 | |
3,722,249 | - | +0.7 | |||
3,722,346 | + | Dsui_3459 | 0.29 | +1.0 | |
3,722,444 | + | Dsui_3459 | 0.41 | +0.3 | |
3,722,590 | + | Dsui_3459 | 0.59 | +0.7 | |
3,722,649 | + | Dsui_3459 | 0.66 | -0.9 | |
3,722,649 | - | +0.1 | |||
3,722,691 | + | Dsui_3459 | 0.71 | +0.9 | |
3,722,766 | + | Dsui_3459 | 0.81 | +0.1 | |
3,722,861 | + | +0.0 |
Or see this region's nucleotide sequence