Strain Fitness in Dechlorosoma suillum PS around Dsui_3269
Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | rich media with hydrogen peroxide 5 mM |
---|---|---|---|---|---|
remove | |||||
3,507,383 | + | Dsui_3268 | 0.41 | -0.3 | |
3,507,387 | + | Dsui_3268 | 0.41 | -0.5 | |
3,507,462 | - | +1.6 | |||
3,507,521 | + | +1.6 | |||
3,507,728 | - | +1.6 | |||
3,507,826 | - | Dsui_3268 | 0.72 | +1.6 | |
3,507,826 | - | Dsui_3268 | 0.72 | -0.4 | |
3,507,854 | + | Dsui_3268 | 0.74 | -0.7 | |
3,507,963 | + | Dsui_3268 | 0.82 | -0.7 | |
3,508,263 | + | +0.1 | |||
3,508,271 | - | -0.7 | |||
3,508,271 | - | +0.3 | |||
3,508,271 | - | +1.6 | |||
3,508,271 | - | +0.6 | |||
3,508,275 | + | -0.4 | |||
3,508,994 | + | +0.6 | |||
3,508,999 | + | -2.0 | |||
3,509,001 | - | -1.2 | |||
3,509,002 | - | +0.6 | |||
3,509,106 | - | +1.2 | |||
3,509,106 | - | +1.0 | |||
3,509,276 | + | Dsui_3270 | 0.44 | +0.1 | |
3,509,282 | + | Dsui_3270 | 0.45 | -0.4 | |
3,509,290 | - | Dsui_3270 | 0.46 | +0.4 | |
3,509,345 | + | Dsui_3270 | 0.55 | -0.4 | |
3,509,497 | - | Dsui_3270 | 0.77 | +0.9 | |
3,509,590 | - | -0.4 | |||
3,509,596 | - | +1.6 | |||
3,509,654 | - | +1.6 | |||
3,509,718 | + | +0.6 | |||
3,509,718 | + | +0.4 | |||
3,509,763 | + | +0.4 | |||
3,509,771 | - | +1.2 | |||
3,509,878 | - | Dsui_3271 | 0.15 | +0.8 |
Or see this region's nucleotide sequence