Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3079 and Dsui_3080 are separated by 145 nucleotides Dsui_3080 and Dsui_3081 are separated by 141 nucleotides Dsui_3081 and Dsui_3082 are separated by 98 nucleotides
Dsui_3079: Dsui_3079 - serine/threonine protein kinase, at 3,295,256 to 3,296,653
_3079
Dsui_3080: Dsui_3080 - molecular chaperone GrpE (heat shock protein), at 3,296,799 to 3,297,356
_3080
Dsui_3081: Dsui_3081 - chaperone protein DnaK, at 3,297,498 to 3,299,429
_3081
Dsui_3082: Dsui_3082 - chaperone protein DnaJ, at 3,299,528 to 3,300,667
_3082
Position (kb)
3297
3298
3299
3300 Strain fitness (log2 ratio)
-1
0
1 at 3296.547 kb on - strand at 3296.565 kb on - strand at 3296.567 kb on - strand at 3296.625 kb on + strand at 3296.662 kb on - strand at 3296.692 kb on + strand at 3296.704 kb on + strand at 3296.713 kb on - strand at 3296.921 kb on + strand, within Dsui_3080 at 3297.341 kb on + strand at 3297.341 kb on + strand at 3297.479 kb on + strand at 3299.008 kb on + strand, within Dsui_3081 at 3299.050 kb on + strand, within Dsui_3081 at 3299.119 kb on + strand, within Dsui_3081 at 3299.498 kb on + strand at 3299.510 kb on + strand at 3299.513 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 3,296,547 - +0.4 3,296,565 - -0.3 3,296,567 - +0.0 3,296,625 + +0.0 3,296,662 - -0.1 3,296,692 + -1.6 3,296,704 + +0.6 3,296,713 - +0.7 3,296,921 + Dsui_3080 0.22 -1.6 3,297,341 + -0.3 3,297,341 + -0.3 3,297,479 + -0.5 3,299,008 + Dsui_3081 0.78 -0.3 3,299,050 + Dsui_3081 0.80 +0.6 3,299,119 + Dsui_3081 0.84 -0.2 3,299,498 + -0.0 3,299,510 + +0.3 3,299,513 - -0.8
Or see this region's nucleotide sequence