Strain Fitness in Dechlorosoma suillum PS around Dsui_3022

Experiment: rich media with hydrogen peroxide 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3020 and Dsui_3021 are separated by 57 nucleotidesDsui_3021 and Dsui_3022 overlap by 4 nucleotidesDsui_3022 and Dsui_3023 are separated by 66 nucleotides Dsui_3020: Dsui_3020 - Protein of unknown function (DUF3124), at 3,233,456 to 3,233,968 _3020 Dsui_3021: Dsui_3021 - putative permease, DMT superfamily, at 3,234,026 to 3,234,913 _3021 Dsui_3022: Dsui_3022 - hypothetical protein, at 3,234,910 to 3,235,074 _3022 Dsui_3023: Dsui_3023 - phosphate/sulfate permease, at 3,235,141 to 3,236,148 _3023 Position (kb) 3234 3235 3236Strain fitness (log2 ratio) -1 0 1at 3233.914 kb on + strand, within Dsui_3020at 3233.914 kb on + strand, within Dsui_3020at 3234.166 kb on + strand, within Dsui_3021at 3234.166 kb on + strandat 3234.166 kb on + strand, within Dsui_3021at 3234.180 kb on - strand, within Dsui_3021at 3234.217 kb on - strand, within Dsui_3021at 3234.253 kb on + strand, within Dsui_3021at 3234.266 kb on + strand, within Dsui_3021at 3234.371 kb on + strand, within Dsui_3021at 3234.383 kb on + strandat 3234.421 kb on - strand, within Dsui_3021at 3234.421 kb on - strand, within Dsui_3021at 3234.428 kb on + strand, within Dsui_3021at 3234.454 kb on - strand, within Dsui_3021at 3234.454 kb on - strand, within Dsui_3021at 3234.586 kb on - strandat 3234.594 kb on - strand, within Dsui_3021at 3234.610 kb on - strand, within Dsui_3021at 3234.710 kb on - strand, within Dsui_3021at 3234.740 kb on + strand, within Dsui_3021at 3234.751 kb on + strand, within Dsui_3021at 3234.772 kb on + strand, within Dsui_3021at 3234.779 kb on + strand, within Dsui_3021at 3234.894 kb on + strandat 3234.894 kb on + strandat 3234.902 kb on - strandat 3234.902 kb on - strandat 3235.040 kb on - strand, within Dsui_3022at 3235.069 kb on + strandat 3235.111 kb on - strandat 3235.111 kb on - strandat 3235.198 kb on - strandat 3235.258 kb on - strand, within Dsui_3023at 3235.258 kb on - strand, within Dsui_3023at 3235.441 kb on + strand, within Dsui_3023at 3235.490 kb on + strand, within Dsui_3023at 3235.498 kb on - strand, within Dsui_3023at 3235.510 kb on + strand, within Dsui_3023at 3235.578 kb on + strand, within Dsui_3023at 3235.586 kb on - strand, within Dsui_3023at 3235.679 kb on - strand, within Dsui_3023at 3235.744 kb on - strand, within Dsui_3023at 3235.761 kb on + strand, within Dsui_3023at 3235.777 kb on - strand, within Dsui_3023at 3235.857 kb on - strand, within Dsui_3023at 3236.014 kb on - strand, within Dsui_3023

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM
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3,233,914 + Dsui_3020 0.89 -1.1
3,233,914 + Dsui_3020 0.89 +0.4
3,234,166 + Dsui_3021 0.16 -0.5
3,234,166 + -0.4
3,234,166 + Dsui_3021 0.16 +0.5
3,234,180 - Dsui_3021 0.17 -0.0
3,234,217 - Dsui_3021 0.22 -0.0
3,234,253 + Dsui_3021 0.26 +0.4
3,234,266 + Dsui_3021 0.27 +0.6
3,234,371 + Dsui_3021 0.39 +0.6
3,234,383 + -1.2
3,234,421 - Dsui_3021 0.44 +0.5
3,234,421 - Dsui_3021 0.44 +0.0
3,234,428 + Dsui_3021 0.45 -1.6
3,234,454 - Dsui_3021 0.48 +0.5
3,234,454 - Dsui_3021 0.48 -0.6
3,234,586 - +0.6
3,234,594 - Dsui_3021 0.64 +0.2
3,234,610 - Dsui_3021 0.66 -0.5
3,234,710 - Dsui_3021 0.77 -0.0
3,234,740 + Dsui_3021 0.80 -0.9
3,234,751 + Dsui_3021 0.82 -0.2
3,234,772 + Dsui_3021 0.84 +0.4
3,234,779 + Dsui_3021 0.85 +0.1
3,234,894 + -0.0
3,234,894 + -0.5
3,234,902 - -0.1
3,234,902 - -0.7
3,235,040 - Dsui_3022 0.79 +0.4
3,235,069 + -0.2
3,235,111 - +0.6
3,235,111 - +1.5
3,235,198 - -0.1
3,235,258 - Dsui_3023 0.12 +0.3
3,235,258 - Dsui_3023 0.12 +0.2
3,235,441 + Dsui_3023 0.30 -0.4
3,235,490 + Dsui_3023 0.35 -0.5
3,235,498 - Dsui_3023 0.35 +0.0
3,235,510 + Dsui_3023 0.37 -0.2
3,235,578 + Dsui_3023 0.43 -0.5
3,235,586 - Dsui_3023 0.44 +0.8
3,235,679 - Dsui_3023 0.53 +0.3
3,235,744 - Dsui_3023 0.60 +0.4
3,235,761 + Dsui_3023 0.62 +0.7
3,235,777 - Dsui_3023 0.63 +0.0
3,235,857 - Dsui_3023 0.71 +0.0
3,236,014 - Dsui_3023 0.87 +0.1

Or see this region's nucleotide sequence