Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2852 and Dsui_2853 are separated by 38 nucleotides Dsui_2853 and Dsui_2854 are separated by 11 nucleotides
Dsui_2852: Dsui_2852 - filamentous hemagglutinin family N-terminal domain protein, at 3,035,230 to 3,040,215
_2852
Dsui_2853: Dsui_2853 - PPIC-type PPIASE family protein, at 3,040,254 to 3,041,102
_2853
Dsui_2854: Dsui_2854 - hemolysin activation/secretion protein, at 3,041,114 to 3,042,748
_2854
Position (kb)
3040
3041
3042 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3039.262 kb on - strand, within Dsui_2852 at 3039.343 kb on + strand, within Dsui_2852 at 3039.356 kb on + strand at 3039.397 kb on - strand, within Dsui_2852 at 3039.413 kb on + strand at 3039.426 kb on - strand, within Dsui_2852 at 3039.443 kb on - strand, within Dsui_2852 at 3039.448 kb on - strand, within Dsui_2852 at 3039.454 kb on - strand, within Dsui_2852 at 3039.474 kb on - strand, within Dsui_2852 at 3039.479 kb on - strand, within Dsui_2852 at 3039.508 kb on - strand, within Dsui_2852 at 3039.516 kb on - strand, within Dsui_2852 at 3039.591 kb on + strand, within Dsui_2852 at 3039.591 kb on + strand at 3039.591 kb on + strand, within Dsui_2852 at 3039.591 kb on + strand, within Dsui_2852 at 3039.592 kb on + strand, within Dsui_2852 at 3039.600 kb on - strand, within Dsui_2852 at 3039.722 kb on + strand at 3039.757 kb on - strand at 3039.763 kb on - strand at 3039.763 kb on - strand at 3039.809 kb on + strand at 3039.817 kb on - strand at 3039.838 kb on - strand at 3039.876 kb on + strand at 3039.962 kb on - strand at 3039.968 kb on - strand at 3039.978 kb on + strand at 3040.032 kb on - strand at 3040.038 kb on + strand at 3040.046 kb on - strand at 3040.051 kb on - strand at 3040.081 kb on - strand at 3040.112 kb on + strand at 3040.115 kb on - strand at 3040.222 kb on + strand at 3040.222 kb on + strand at 3040.297 kb on + strand at 3040.340 kb on + strand, within Dsui_2853 at 3040.536 kb on + strand, within Dsui_2853 at 3040.566 kb on - strand, within Dsui_2853 at 3040.607 kb on - strand, within Dsui_2853 at 3040.635 kb on + strand, within Dsui_2853 at 3040.691 kb on - strand at 3040.747 kb on + strand, within Dsui_2853 at 3040.755 kb on - strand, within Dsui_2853 at 3040.857 kb on + strand, within Dsui_2853 at 3040.875 kb on + strand, within Dsui_2853 at 3040.904 kb on + strand, within Dsui_2853 at 3040.904 kb on + strand at 3040.904 kb on + strand, within Dsui_2853 at 3040.912 kb on - strand, within Dsui_2853 at 3040.912 kb on - strand, within Dsui_2853 at 3040.924 kb on + strand, within Dsui_2853 at 3041.028 kb on - strand at 3041.033 kb on - strand at 3041.033 kb on - strand at 3041.038 kb on - strand at 3041.089 kb on - strand at 3041.089 kb on - strand at 3041.117 kb on + strand at 3041.133 kb on - strand at 3041.149 kb on + strand at 3041.157 kb on - strand at 3041.187 kb on + strand at 3041.257 kb on + strand at 3041.257 kb on + strand at 3041.257 kb on + strand at 3041.257 kb on + strand at 3041.257 kb on + strand at 3041.265 kb on - strand at 3041.265 kb on - strand at 3041.265 kb on - strand at 3041.265 kb on - strand at 3041.265 kb on - strand at 3041.331 kb on - strand at 3041.331 kb on - strand, within Dsui_2854 at 3041.433 kb on - strand, within Dsui_2854 at 3041.442 kb on + strand at 3041.467 kb on + strand, within Dsui_2854 at 3041.475 kb on - strand, within Dsui_2854 at 3041.476 kb on - strand at 3041.589 kb on - strand, within Dsui_2854 at 3041.590 kb on - strand, within Dsui_2854 at 3041.590 kb on - strand, within Dsui_2854 at 3041.612 kb on - strand at 3041.676 kb on + strand, within Dsui_2854 at 3041.695 kb on + strand at 3041.758 kb on - strand, within Dsui_2854 at 3041.784 kb on + strand at 3041.832 kb on - strand, within Dsui_2854 at 3041.860 kb on + strand at 3041.916 kb on + strand, within Dsui_2854 at 3041.953 kb on + strand, within Dsui_2854 at 3041.962 kb on + strand, within Dsui_2854 at 3041.962 kb on + strand, within Dsui_2854 at 3041.970 kb on - strand at 3042.006 kb on + strand at 3042.009 kb on + strand, within Dsui_2854 at 3042.009 kb on + strand, within Dsui_2854 at 3042.009 kb on + strand, within Dsui_2854 at 3042.017 kb on - strand at 3042.025 kb on - strand at 3042.066 kb on + strand, within Dsui_2854 at 3042.072 kb on - strand, within Dsui_2854 at 3042.084 kb on - strand at 3042.085 kb on + strand, within Dsui_2854 at 3042.086 kb on + strand, within Dsui_2854
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 3,039,262 - Dsui_2852 0.81 -2.1 3,039,343 + Dsui_2852 0.82 -1.2 3,039,356 + +3.2 3,039,397 - Dsui_2852 0.84 -0.1 3,039,413 + +0.1 3,039,426 - Dsui_2852 0.84 -0.5 3,039,443 - Dsui_2852 0.84 +0.3 3,039,448 - Dsui_2852 0.85 -0.5 3,039,454 - Dsui_2852 0.85 -1.5 3,039,474 - Dsui_2852 0.85 -0.1 3,039,479 - Dsui_2852 0.85 -0.5 3,039,508 - Dsui_2852 0.86 +1.2 3,039,516 - Dsui_2852 0.86 -0.5 3,039,591 + Dsui_2852 0.87 -0.7 3,039,591 + +1.2 3,039,591 + Dsui_2852 0.87 -0.2 3,039,591 + Dsui_2852 0.87 -0.2 3,039,592 + Dsui_2852 0.87 -0.3 3,039,600 - Dsui_2852 0.88 -1.5 3,039,722 + -0.3 3,039,757 - -0.1 3,039,763 - +0.6 3,039,763 - +0.8 3,039,809 + -0.3 3,039,817 - -0.7 3,039,838 - -0.9 3,039,876 + -0.1 3,039,962 - -0.5 3,039,968 - +0.1 3,039,978 + +0.6 3,040,032 - +0.2 3,040,038 + +0.2 3,040,046 - +1.1 3,040,051 - +0.1 3,040,081 - +0.1 3,040,112 + +2.2 3,040,115 - -0.1 3,040,222 + -0.2 3,040,222 + +0.6 3,040,297 + +0.1 3,040,340 + Dsui_2853 0.10 -0.7 3,040,536 + Dsui_2853 0.33 +0.7 3,040,566 - Dsui_2853 0.37 -0.7 3,040,607 - Dsui_2853 0.42 +0.1 3,040,635 + Dsui_2853 0.45 -1.8 3,040,691 - -1.2 3,040,747 + Dsui_2853 0.58 -1.7 3,040,755 - Dsui_2853 0.59 -0.9 3,040,857 + Dsui_2853 0.71 -1.0 3,040,875 + Dsui_2853 0.73 -0.3 3,040,904 + Dsui_2853 0.77 -0.4 3,040,904 + +0.4 3,040,904 + Dsui_2853 0.77 +0.7 3,040,912 - Dsui_2853 0.78 -0.0 3,040,912 - Dsui_2853 0.78 -0.1 3,040,924 + Dsui_2853 0.79 -1.2 3,041,028 - -1.4 3,041,033 - -0.2 3,041,033 - +0.6 3,041,038 - -0.8 3,041,089 - -0.7 3,041,089 - +0.2 3,041,117 + -0.0 3,041,133 - +0.6 3,041,149 + +1.2 3,041,157 - +0.2 3,041,187 + -0.2 3,041,257 + -0.0 3,041,257 + +0.1 3,041,257 + -1.5 3,041,257 + -0.4 3,041,257 + -0.4 3,041,265 - +2.6 3,041,265 - -1.9 3,041,265 - -0.4 3,041,265 - +0.1 3,041,265 - -0.5 3,041,331 - +1.6 3,041,331 - Dsui_2854 0.13 -1.4 3,041,433 - Dsui_2854 0.20 -0.5 3,041,442 + -1.2 3,041,467 + Dsui_2854 0.22 +1.4 3,041,475 - Dsui_2854 0.22 -0.1 3,041,476 - -0.7 3,041,589 - Dsui_2854 0.29 -1.3 3,041,590 - Dsui_2854 0.29 -0.4 3,041,590 - Dsui_2854 0.29 +0.4 3,041,612 - -0.9 3,041,676 + Dsui_2854 0.34 -0.2 3,041,695 + +0.4 3,041,758 - Dsui_2854 0.39 +1.5 3,041,784 + +1.1 3,041,832 - Dsui_2854 0.44 -0.6 3,041,860 + +0.4 3,041,916 + Dsui_2854 0.49 +0.9 3,041,953 + Dsui_2854 0.51 +0.2 3,041,962 + Dsui_2854 0.52 -1.4 3,041,962 + Dsui_2854 0.52 -0.1 3,041,970 - -0.9 3,042,006 + -0.4 3,042,009 + Dsui_2854 0.55 +0.6 3,042,009 + Dsui_2854 0.55 -0.1 3,042,009 + Dsui_2854 0.55 +0.3 3,042,017 - +0.1 3,042,025 - -0.4 3,042,066 + Dsui_2854 0.58 -1.4 3,042,072 - Dsui_2854 0.59 +1.6 3,042,084 - +0.6 3,042,085 + Dsui_2854 0.59 +0.0 3,042,086 + Dsui_2854 0.59 -1.2
Or see this region's nucleotide sequence