Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2828 and Dsui_2829 are separated by 162 nucleotides Dsui_2829 and Dsui_2830 overlap by 4 nucleotides
Dsui_2828: Dsui_2828 - hypothetical protein, at 3,005,060 to 3,006,079
_2828
Dsui_2829: Dsui_2829 - hypothetical protein, at 3,006,242 to 3,006,568
_2829
Dsui_2830: Dsui_2830 - adenine specific DNA methylase Mod, at 3,006,565 to 3,007,731
_2830
Position (kb)
3006
3007 Strain fitness (log2 ratio)
-1
0
1 at 3005.248 kb on - strand, within Dsui_2828 at 3005.280 kb on + strand, within Dsui_2828 at 3005.297 kb on + strand at 3005.472 kb on + strand, within Dsui_2828 at 3005.572 kb on + strand, within Dsui_2828 at 3005.636 kb on + strand, within Dsui_2828 at 3005.644 kb on - strand at 3005.644 kb on - strand, within Dsui_2828 at 3005.665 kb on + strand, within Dsui_2828 at 3005.724 kb on - strand at 3005.764 kb on + strand, within Dsui_2828 at 3005.825 kb on - strand, within Dsui_2828 at 3005.851 kb on + strand, within Dsui_2828 at 3005.862 kb on + strand, within Dsui_2828 at 3005.971 kb on - strand, within Dsui_2828 at 3005.978 kb on - strand at 3005.978 kb on - strand at 3005.982 kb on + strand at 3005.990 kb on - strand at 3005.990 kb on - strand at 3005.992 kb on + strand at 3005.992 kb on + strand at 3005.992 kb on + strand at 3006.212 kb on + strand at 3006.305 kb on + strand, within Dsui_2829 at 3006.310 kb on + strand, within Dsui_2829 at 3006.310 kb on + strand, within Dsui_2829 at 3006.310 kb on + strand, within Dsui_2829 at 3006.322 kb on + strand, within Dsui_2829 at 3006.322 kb on + strand, within Dsui_2829 at 3006.322 kb on + strand, within Dsui_2829 at 3006.328 kb on + strand, within Dsui_2829 at 3006.436 kb on + strand, within Dsui_2829 at 3006.479 kb on + strand, within Dsui_2829 at 3006.498 kb on + strand, within Dsui_2829 at 3006.547 kb on + strand at 3006.548 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 3,005,248 - Dsui_2828 0.18 +0.7 3,005,280 + Dsui_2828 0.22 +0.8 3,005,297 + +0.1 3,005,472 + Dsui_2828 0.40 -1.7 3,005,572 + Dsui_2828 0.50 +0.5 3,005,636 + Dsui_2828 0.56 -1.5 3,005,644 - -0.9 3,005,644 - Dsui_2828 0.57 -1.4 3,005,665 + Dsui_2828 0.59 -0.6 3,005,724 - -0.6 3,005,764 + Dsui_2828 0.69 -0.5 3,005,825 - Dsui_2828 0.75 +0.5 3,005,851 + Dsui_2828 0.78 -1.4 3,005,862 + Dsui_2828 0.79 -0.0 3,005,971 - Dsui_2828 0.89 -0.9 3,005,978 - -0.6 3,005,978 - -0.6 3,005,982 + -0.4 3,005,990 - -0.5 3,005,990 - -0.1 3,005,992 + +0.8 3,005,992 + -0.9 3,005,992 + +0.7 3,006,212 + -0.3 3,006,305 + Dsui_2829 0.19 +0.2 3,006,310 + Dsui_2829 0.21 +0.1 3,006,310 + Dsui_2829 0.21 -0.2 3,006,310 + Dsui_2829 0.21 -0.0 3,006,322 + Dsui_2829 0.24 -0.3 3,006,322 + Dsui_2829 0.24 -0.3 3,006,322 + Dsui_2829 0.24 -0.0 3,006,328 + Dsui_2829 0.26 -0.1 3,006,436 + Dsui_2829 0.59 -0.4 3,006,479 + Dsui_2829 0.72 -0.3 3,006,498 + Dsui_2829 0.78 -0.1 3,006,547 + -0.1 3,006,548 + -0.1
Or see this region's nucleotide sequence