Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2750 and Dsui_2751 are separated by 76 nucleotides Dsui_2751 and Dsui_2752 are separated by 300 nucleotides
Dsui_2750: Dsui_2750 - cyanophycin synthetase, at 2,905,615 to 2,908,200
_2750
Dsui_2751: Dsui_2751 - cyanophycin synthetase, at 2,908,277 to 2,910,445
_2751
Dsui_2752: Dsui_2752 - ABC-type multidrug transport system, ATPase and permease component, at 2,910,746 to 2,912,953
_2752
Position (kb)
2908
2909
2910
2911 Strain fitness (log2 ratio)
-1
0
1
2 at 2907.428 kb on + strand, within Dsui_2750 at 2907.572 kb on + strand, within Dsui_2750 at 2907.572 kb on + strand, within Dsui_2750 at 2907.663 kb on + strand, within Dsui_2750 at 2907.668 kb on + strand at 2907.671 kb on - strand, within Dsui_2750 at 2907.671 kb on - strand, within Dsui_2750 at 2907.703 kb on - strand, within Dsui_2750 at 2907.786 kb on - strand, within Dsui_2750 at 2907.811 kb on + strand at 2907.902 kb on - strand, within Dsui_2750 at 2907.921 kb on - strand, within Dsui_2750 at 2907.964 kb on + strand at 2908.169 kb on - strand at 2908.169 kb on - strand at 2908.184 kb on - strand at 2908.244 kb on + strand at 2908.295 kb on + strand at 2908.303 kb on - strand at 2908.357 kb on - strand at 2908.466 kb on + strand at 2908.532 kb on - strand, within Dsui_2751 at 2908.662 kb on + strand at 2908.672 kb on - strand, within Dsui_2751 at 2908.866 kb on + strand, within Dsui_2751 at 2908.874 kb on - strand, within Dsui_2751 at 2908.896 kb on - strand, within Dsui_2751 at 2909.048 kb on - strand, within Dsui_2751 at 2909.060 kb on - strand, within Dsui_2751 at 2909.156 kb on - strand, within Dsui_2751 at 2909.156 kb on - strand, within Dsui_2751 at 2909.168 kb on - strand, within Dsui_2751 at 2909.181 kb on - strand, within Dsui_2751 at 2909.574 kb on + strand at 2909.619 kb on - strand, within Dsui_2751 at 2909.619 kb on - strand, within Dsui_2751 at 2909.886 kb on + strand at 2909.953 kb on + strand at 2910.063 kb on - strand, within Dsui_2751 at 2910.098 kb on - strand, within Dsui_2751 at 2910.183 kb on - strand, within Dsui_2751 at 2910.258 kb on - strand at 2910.286 kb on + strand at 2910.294 kb on - strand at 2910.392 kb on - strand at 2910.392 kb on - strand at 2910.407 kb on - strand at 2910.414 kb on - strand at 2910.448 kb on - strand at 2910.449 kb on - strand at 2910.488 kb on - strand at 2910.488 kb on - strand at 2910.488 kb on - strand at 2910.488 kb on - strand at 2910.547 kb on + strand at 2910.555 kb on - strand at 2910.555 kb on - strand at 2910.555 kb on - strand at 2910.573 kb on + strand at 2910.581 kb on - strand at 2910.589 kb on + strand at 2910.589 kb on + strand at 2910.597 kb on - strand at 2910.651 kb on + strand at 2910.651 kb on + strand at 2911.316 kb on + strand, within Dsui_2752 at 2911.414 kb on + strand, within Dsui_2752
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 2,907,428 + Dsui_2750 0.70 -0.6 2,907,572 + Dsui_2750 0.76 +1.6 2,907,572 + Dsui_2750 0.76 -0.7 2,907,663 + Dsui_2750 0.79 -0.8 2,907,668 + +1.3 2,907,671 - Dsui_2750 0.80 +0.5 2,907,671 - Dsui_2750 0.80 -0.1 2,907,703 - Dsui_2750 0.81 +0.4 2,907,786 - Dsui_2750 0.84 +0.2 2,907,811 + +0.6 2,907,902 - Dsui_2750 0.88 +0.1 2,907,921 - Dsui_2750 0.89 +0.2 2,907,964 + +1.3 2,908,169 - +0.4 2,908,169 - +0.1 2,908,184 - -0.0 2,908,244 + +1.9 2,908,295 + +0.3 2,908,303 - +0.3 2,908,357 - +0.3 2,908,466 + +1.5 2,908,532 - Dsui_2751 0.12 +0.0 2,908,662 + -0.1 2,908,672 - Dsui_2751 0.18 +0.3 2,908,866 + Dsui_2751 0.27 +0.5 2,908,874 - Dsui_2751 0.28 +0.9 2,908,896 - Dsui_2751 0.29 +0.4 2,909,048 - Dsui_2751 0.36 +0.2 2,909,060 - Dsui_2751 0.36 +0.4 2,909,156 - Dsui_2751 0.41 +0.4 2,909,156 - Dsui_2751 0.41 +0.3 2,909,168 - Dsui_2751 0.41 +0.5 2,909,181 - Dsui_2751 0.42 +0.3 2,909,574 + -0.1 2,909,619 - Dsui_2751 0.62 -0.2 2,909,619 - Dsui_2751 0.62 +0.9 2,909,886 + +0.7 2,909,953 + -0.4 2,910,063 - Dsui_2751 0.82 +0.3 2,910,098 - Dsui_2751 0.84 +0.4 2,910,183 - Dsui_2751 0.88 +0.9 2,910,258 - +0.2 2,910,286 + +0.9 2,910,294 - +0.2 2,910,392 - -0.4 2,910,392 - +0.0 2,910,407 - +0.3 2,910,414 - -0.1 2,910,448 - +0.7 2,910,449 - +0.4 2,910,488 - +0.7 2,910,488 - +0.7 2,910,488 - +0.6 2,910,488 - +0.2 2,910,547 + -0.3 2,910,555 - +0.3 2,910,555 - +0.7 2,910,555 - +0.6 2,910,573 + +0.3 2,910,581 - -0.8 2,910,589 + +0.5 2,910,589 + +0.7 2,910,597 - +0.6 2,910,651 + +0.4 2,910,651 + -0.3 2,911,316 + Dsui_2752 0.26 -0.5 2,911,414 + Dsui_2752 0.30 -0.1
Or see this region's nucleotide sequence