Strain Fitness in Dechlorosoma suillum PS around Dsui_2559
Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | rich media with hydrogen peroxide 5 mM |
---|---|---|---|---|---|
remove | |||||
2,709,777 | + | -0.8 | |||
2,709,800 | + | -0.6 | |||
2,709,800 | + | +1.7 | |||
2,709,941 | + | +0.7 | |||
2,709,966 | - | +0.3 | |||
2,710,004 | + | -1.0 | |||
2,710,004 | + | -0.8 | |||
2,710,124 | - | Dsui_2559 | 0.19 | -1.0 | |
2,710,141 | + | Dsui_2559 | 0.24 | -0.5 | |
2,710,149 | + | Dsui_2559 | 0.27 | +1.0 | |
2,710,166 | + | Dsui_2559 | 0.31 | -0.2 | |
2,710,191 | + | Dsui_2559 | 0.38 | -0.8 | |
2,710,280 | - | Dsui_2559 | 0.64 | -0.0 | |
2,710,280 | - | Dsui_2559 | 0.64 | -0.4 | |
2,710,349 | + | -1.0 | |||
2,710,354 | + | Dsui_2559 | 0.84 | -0.3 | |
2,710,414 | + | +0.9 | |||
2,710,447 | - | +0.4 | |||
2,710,546 | - | +0.0 | |||
2,710,596 | + | -0.3 | |||
2,710,769 | + | Dsui_2560 | 0.29 | -0.6 | |
2,710,896 | - | -0.3 | |||
2,710,973 | - | Dsui_2560 | 0.52 | -1.1 | |
2,710,983 | - | Dsui_2560 | 0.53 | -1.3 | |
2,711,031 | - | Dsui_2560 | 0.59 | -0.2 | |
2,711,040 | + | -1.0 | |||
2,711,048 | - | +0.4 | |||
2,711,131 | - | +1.2 | |||
2,711,131 | - | Dsui_2560 | 0.70 | -0.6 | |
2,711,214 | - | Dsui_2560 | 0.79 | -1.1 | |
2,711,408 | + | -1.1 |
Or see this region's nucleotide sequence