Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2553 and Dsui_2554 are separated by 127 nucleotides Dsui_2554 and Dsui_2555 overlap by 4 nucleotides Dsui_2555 and Dsui_2556 are separated by 87 nucleotides Dsui_2556 and Dsui_2557 are separated by 110 nucleotides
Dsui_2553: Dsui_2553 - Phage X family/Phage replication protein CRI, at 2,704,500 to 2,705,582
_2553
Dsui_2554: Dsui_2554 - hypothetical protein, at 2,705,710 to 2,705,973
_2554
Dsui_2555: Dsui_2555 - Bacteriophage coat protein B, at 2,705,970 to 2,706,167
_2555
Dsui_2556: Dsui_2556 - hypothetical protein, at 2,706,255 to 2,707,346
_2556
Dsui_2557: Dsui_2557 - transposase, at 2,707,457 to 2,708,947
_2557
Position (kb)
2706
2707
2708 Strain fitness (log2 ratio)
-2
-1
0
1 at 2705.335 kb on + strand, within Dsui_2553 at 2705.527 kb on - strand at 2705.577 kb on + strand at 2705.680 kb on - strand at 2705.681 kb on - strand at 2705.753 kb on - strand, within Dsui_2554 at 2705.824 kb on + strand, within Dsui_2554 at 2705.894 kb on + strand, within Dsui_2554 at 2705.939 kb on + strand at 2706.007 kb on + strand, within Dsui_2555 at 2706.015 kb on - strand, within Dsui_2555 at 2706.043 kb on - strand, within Dsui_2555 at 2706.146 kb on - strand, within Dsui_2555 at 2706.170 kb on + strand at 2706.516 kb on - strand, within Dsui_2556 at 2706.542 kb on - strand, within Dsui_2556 at 2706.542 kb on - strand, within Dsui_2556 at 2706.542 kb on - strand at 2706.598 kb on - strand at 2706.666 kb on - strand, within Dsui_2556 at 2706.701 kb on + strand, within Dsui_2556 at 2706.737 kb on - strand, within Dsui_2556 at 2706.757 kb on + strand, within Dsui_2556 at 2706.896 kb on - strand, within Dsui_2556 at 2706.962 kb on - strand, within Dsui_2556 at 2706.965 kb on - strand, within Dsui_2556 at 2707.165 kb on + strand, within Dsui_2556 at 2707.170 kb on + strand, within Dsui_2556
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 2,705,335 + Dsui_2553 0.77 -0.3 2,705,527 - -0.3 2,705,577 + -0.3 2,705,680 - -0.8 2,705,681 - -0.6 2,705,753 - Dsui_2554 0.16 -0.3 2,705,824 + Dsui_2554 0.43 -1.0 2,705,894 + Dsui_2554 0.70 +0.4 2,705,939 + +0.0 2,706,007 + Dsui_2555 0.19 -1.0 2,706,015 - Dsui_2555 0.23 -0.2 2,706,043 - Dsui_2555 0.37 -0.5 2,706,146 - Dsui_2555 0.89 +0.5 2,706,170 + -1.0 2,706,516 - Dsui_2556 0.24 -0.3 2,706,542 - Dsui_2556 0.26 +0.0 2,706,542 - Dsui_2556 0.26 -0.8 2,706,542 - -0.6 2,706,598 - +1.3 2,706,666 - Dsui_2556 0.38 +0.7 2,706,701 + Dsui_2556 0.41 +0.6 2,706,737 - Dsui_2556 0.44 -0.6 2,706,757 + Dsui_2556 0.46 +0.6 2,706,896 - Dsui_2556 0.59 -1.1 2,706,962 - Dsui_2556 0.65 +0.4 2,706,965 - Dsui_2556 0.65 -2.1 2,707,165 + Dsui_2556 0.83 -0.4 2,707,170 + Dsui_2556 0.84 -0.6
Or see this region's nucleotide sequence