Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2534 and Dsui_2535 are separated by 75 nucleotides Dsui_2535 and Dsui_2536 overlap by 66 nucleotides Dsui_2536 and Dsui_2537 are separated by 205 nucleotides
Dsui_2534: Dsui_2534 - TRAP transporter, DctM subunit, at 2,685,636 to 2,686,925
_2534
Dsui_2535: Dsui_2535 - putative divalent heavy-metal cations transporter, at 2,687,001 to 2,687,774
_2535
Dsui_2536: Dsui_2536 - hypothetical protein, at 2,687,709 to 2,688,020
_2536
Dsui_2537: Dsui_2537 - poly(R)-hydroxyalkanoic acid synthase, class I, at 2,688,226 to 2,689,965
_2537
Position (kb)
2687
2688
2689 Strain fitness (log2 ratio)
-1
0
1 at 2686.734 kb on - strand at 2686.828 kb on - strand at 2687.077 kb on + strand at 2687.101 kb on + strand, within Dsui_2535 at 2687.200 kb on - strand, within Dsui_2535 at 2687.386 kb on - strand, within Dsui_2535 at 2687.518 kb on - strand at 2687.569 kb on + strand, within Dsui_2535 at 2687.689 kb on + strand, within Dsui_2535 at 2687.695 kb on + strand, within Dsui_2535 at 2687.768 kb on + strand at 2687.776 kb on - strand, within Dsui_2536 at 2687.860 kb on - strand, within Dsui_2536 at 2687.860 kb on - strand, within Dsui_2536 at 2687.896 kb on - strand, within Dsui_2536 at 2687.929 kb on + strand, within Dsui_2536 at 2688.204 kb on + strand at 2688.206 kb on + strand at 2688.214 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 2,686,734 - +1.4 2,686,828 - +0.2 2,687,077 + +0.4 2,687,101 + Dsui_2535 0.13 +0.3 2,687,200 - Dsui_2535 0.26 +0.8 2,687,386 - Dsui_2535 0.50 +0.4 2,687,518 - +0.4 2,687,569 + Dsui_2535 0.73 -0.0 2,687,689 + Dsui_2535 0.89 +0.2 2,687,695 + Dsui_2535 0.90 +0.3 2,687,768 + +0.2 2,687,776 - Dsui_2536 0.21 +0.3 2,687,860 - Dsui_2536 0.48 -0.0 2,687,860 - Dsui_2536 0.48 +0.8 2,687,896 - Dsui_2536 0.60 +0.4 2,687,929 + Dsui_2536 0.71 +0.3 2,688,204 + +0.1 2,688,206 + -0.0 2,688,214 - -0.0
Or see this region's nucleotide sequence