Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2387 and Dsui_2388 overlap by 14 nucleotides Dsui_2388 and Dsui_2389 are separated by 23 nucleotides Dsui_2389 and Dsui_2390 are separated by 101 nucleotides Dsui_2390 and Dsui_2391 overlap by 4 nucleotides
Dsui_2387: Dsui_2387 - hypothetical protein, at 2,540,017 to 2,540,622
_2387
Dsui_2388: Dsui_2388 - putative dioxygenase, at 2,540,609 to 2,541,415
_2388
Dsui_2389: Dsui_2389 - putative membrane protein, at 2,541,439 to 2,542,710
_2389
Dsui_2390: Dsui_2390 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 2,542,812 to 2,543,528
_2390
Dsui_2391: Dsui_2391 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 2,543,525 to 2,544,013
_2391
Position (kb)
2541
2542
2543 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2540.559 kb on - strand at 2540.610 kb on + strand at 2540.637 kb on - strand at 2540.855 kb on - strand, within Dsui_2388 at 2540.979 kb on - strand, within Dsui_2388 at 2541.025 kb on + strand at 2541.180 kb on - strand at 2541.506 kb on - strand at 2541.558 kb on - strand at 2541.660 kb on + strand at 2541.774 kb on - strand, within Dsui_2389 at 2541.931 kb on - strand at 2541.960 kb on + strand at 2541.997 kb on - strand, within Dsui_2389 at 2542.019 kb on + strand at 2542.034 kb on + strand at 2542.092 kb on - strand, within Dsui_2389 at 2542.149 kb on - strand, within Dsui_2389 at 2542.181 kb on - strand, within Dsui_2389 at 2542.218 kb on - strand, within Dsui_2389 at 2542.345 kb on - strand, within Dsui_2389 at 2542.374 kb on + strand, within Dsui_2389 at 2542.430 kb on - strand at 2542.579 kb on - strand, within Dsui_2389 at 2542.583 kb on - strand at 2542.583 kb on - strand at 2542.629 kb on - strand at 2542.652 kb on - strand at 2542.652 kb on - strand at 2542.652 kb on - strand at 2542.652 kb on - strand at 2542.652 kb on - strand at 2542.652 kb on - strand at 2542.652 kb on - strand at 2542.786 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 2,540,559 - +0.2 2,540,610 + +1.7 2,540,637 - +1.6 2,540,855 - Dsui_2388 0.30 -0.1 2,540,979 - Dsui_2388 0.46 +0.6 2,541,025 + -0.6 2,541,180 - +0.7 2,541,506 - -0.3 2,541,558 - -0.2 2,541,660 + +0.2 2,541,774 - Dsui_2389 0.26 +1.4 2,541,931 - -0.1 2,541,960 + -0.6 2,541,997 - Dsui_2389 0.44 +0.1 2,542,019 + +1.7 2,542,034 + +0.2 2,542,092 - Dsui_2389 0.51 +0.7 2,542,149 - Dsui_2389 0.56 +0.8 2,542,181 - Dsui_2389 0.58 -1.6 2,542,218 - Dsui_2389 0.61 +0.4 2,542,345 - Dsui_2389 0.71 +0.1 2,542,374 + Dsui_2389 0.74 -2.2 2,542,430 - +2.7 2,542,579 - Dsui_2389 0.90 +0.2 2,542,583 - -1.0 2,542,583 - +0.5 2,542,629 - +0.7 2,542,652 - +0.1 2,542,652 - +1.7 2,542,652 - -0.6 2,542,652 - +0.9 2,542,652 - +0.4 2,542,652 - +0.3 2,542,652 - +1.3 2,542,786 - +0.6
Or see this region's nucleotide sequence