Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2375 and Dsui_2376 overlap by 4 nucleotides Dsui_2376 and Dsui_2377 are separated by 10 nucleotides Dsui_2377 and Dsui_2378 are separated by 76 nucleotides Dsui_2378 and Dsui_2379 are separated by 78 nucleotides
Dsui_2375: Dsui_2375 - Fe-S protein assembly chaperone HscA, at 2,524,637 to 2,526,517
_2375
Dsui_2376: Dsui_2376 - ferredoxin, 2Fe-2S type, ISC system, at 2,526,514 to 2,526,855
_2376
Dsui_2377: Dsui_2377 - FeS assembly protein IscX, at 2,526,866 to 2,527,060
_2377
Dsui_2378: Dsui_2378 - hypothetical protein, at 2,527,137 to 2,527,454
_2378
Dsui_2379: Dsui_2379 - phosphoserine phosphatase SerB, at 2,527,533 to 2,528,375
_2379
Position (kb)
2526
2527
2528 Strain fitness (log2 ratio)
-1
0
1 at 2526.849 kb on + strand at 2526.849 kb on + strand at 2526.849 kb on + strand at 2526.857 kb on - strand at 2526.976 kb on + strand, within Dsui_2377 at 2527.003 kb on - strand, within Dsui_2377 at 2527.068 kb on - strand at 2527.127 kb on + strand at 2527.146 kb on - strand at 2527.206 kb on + strand, within Dsui_2378 at 2527.310 kb on - strand, within Dsui_2378 at 2527.487 kb on + strand at 2527.509 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 2,526,849 + -0.1 2,526,849 + +0.4 2,526,849 + -0.1 2,526,857 - +0.1 2,526,976 + Dsui_2377 0.56 +0.5 2,527,003 - Dsui_2377 0.70 +0.5 2,527,068 - +0.5 2,527,127 + -0.3 2,527,146 - -0.5 2,527,206 + Dsui_2378 0.22 -0.2 2,527,310 - Dsui_2378 0.54 -0.0 2,527,487 + +0.5 2,527,509 - +0.3
Or see this region's nucleotide sequence