Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2353 and Dsui_2354 are separated by 121 nucleotides Dsui_2354 and Dsui_2355 are separated by 14 nucleotides Dsui_2355 and Dsui_2356 are separated by 50 nucleotides Dsui_2356 and Dsui_2357 are separated by 76 nucleotides
Dsui_2353: Dsui_2353 - transcriptional regulator, at 2,505,075 to 2,505,974
_2353
Dsui_2354: Dsui_2354 - hypothetical protein, at 2,506,096 to 2,506,941
_2354
Dsui_2355: Dsui_2355 - cytochrome B561, at 2,506,956 to 2,507,495
_2355
Dsui_2356: Dsui_2356 - hypothetical protein, at 2,507,546 to 2,508,124
_2356
Dsui_2357: Dsui_2357 - hypothetical protein, at 2,508,201 to 2,508,767
_2357
Position (kb)
2506
2507
2508 Strain fitness (log2 ratio)
-1
0
1
2 at 2505.994 kb on - strand at 2506.103 kb on + strand at 2506.244 kb on + strand at 2506.263 kb on + strand at 2506.280 kb on + strand at 2506.457 kb on - strand at 2506.485 kb on + strand at 2506.638 kb on - strand at 2506.735 kb on + strand at 2506.799 kb on - strand at 2506.861 kb on - strand at 2506.982 kb on - strand at 2506.995 kb on + strand at 2506.995 kb on + strand at 2507.014 kb on + strand, within Dsui_2355 at 2507.121 kb on - strand, within Dsui_2355 at 2507.282 kb on + strand, within Dsui_2355 at 2507.282 kb on + strand, within Dsui_2355 at 2507.318 kb on + strand, within Dsui_2355 at 2507.349 kb on + strand at 2507.363 kb on + strand, within Dsui_2355 at 2507.371 kb on - strand at 2507.489 kb on + strand at 2507.522 kb on + strand at 2507.528 kb on - strand at 2507.617 kb on + strand at 2507.861 kb on + strand at 2507.909 kb on + strand at 2508.118 kb on + strand at 2508.148 kb on + strand at 2508.159 kb on + strand at 2508.169 kb on + strand at 2508.292 kb on + strand at 2508.466 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 2,505,994 - +0.2 2,506,103 + +1.7 2,506,244 + +0.1 2,506,263 + -0.3 2,506,280 + +1.7 2,506,457 - -0.6 2,506,485 + +0.7 2,506,638 - +1.3 2,506,735 + +1.7 2,506,799 - +1.7 2,506,861 - +1.7 2,506,982 - +0.7 2,506,995 + +0.7 2,506,995 + -0.3 2,507,014 + Dsui_2355 0.11 -0.7 2,507,121 - Dsui_2355 0.31 +0.1 2,507,282 + Dsui_2355 0.60 +0.1 2,507,282 + Dsui_2355 0.60 -0.2 2,507,318 + Dsui_2355 0.67 +0.4 2,507,349 + +0.1 2,507,363 + Dsui_2355 0.75 +0.3 2,507,371 - +0.7 2,507,489 + +1.5 2,507,522 + +2.3 2,507,528 - +1.7 2,507,617 + -0.9 2,507,861 + +0.4 2,507,909 + -1.3 2,508,118 + +0.7 2,508,148 + +0.7 2,508,159 + +0.1 2,508,169 + -1.1 2,508,292 + +1.7 2,508,466 - +1.1
Or see this region's nucleotide sequence