Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2304 and Dsui_2305 overlap by 1 nucleotides Dsui_2305 and Dsui_2306 are separated by 200 nucleotides Dsui_2306 and Dsui_2307 are separated by 31 nucleotides Dsui_2307 and Dsui_2308 are separated by 16 nucleotides
Dsui_2304: Dsui_2304 - electron transfer flavoprotein, alpha subunit, at 2,461,060 to 2,461,989
_2304
Dsui_2305: Dsui_2305 - electron transfer flavoprotein, beta subunit, at 2,461,989 to 2,462,738
_2305
Dsui_2306: Dsui_2306 - transcriptional regulator, at 2,462,939 to 2,463,523
_2306
Dsui_2307: Dsui_2307 - putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component, at 2,463,555 to 2,464,214
_2307
Dsui_2308: Dsui_2308 - lysophospholipase L1-like esterase, at 2,464,231 to 2,464,854
_2308
Position (kb)
2462
2463
2464 Strain fitness (log2 ratio)
-1
0
1 at 2462.045 kb on + strand at 2462.061 kb on - strand at 2462.089 kb on - strand, within Dsui_2305 at 2462.210 kb on - strand, within Dsui_2305 at 2462.272 kb on - strand, within Dsui_2305 at 2462.311 kb on - strand, within Dsui_2305 at 2462.439 kb on - strand, within Dsui_2305 at 2462.458 kb on - strand, within Dsui_2305 at 2462.690 kb on + strand at 2462.747 kb on + strand at 2462.747 kb on + strand at 2462.755 kb on - strand at 2462.755 kb on - strand at 2462.755 kb on - strand at 2462.755 kb on - strand at 2462.755 kb on - strand at 2462.788 kb on + strand at 2462.796 kb on - strand at 2462.806 kb on + strand at 2462.814 kb on - strand at 2462.814 kb on - strand at 2462.820 kb on + strand at 2462.828 kb on - strand at 2462.830 kb on + strand at 2462.838 kb on - strand at 2462.870 kb on - strand at 2463.108 kb on + strand, within Dsui_2306 at 2463.116 kb on - strand at 2463.126 kb on - strand at 2463.126 kb on - strand, within Dsui_2306 at 2463.138 kb on + strand, within Dsui_2306 at 2463.227 kb on + strand, within Dsui_2306 at 2463.340 kb on + strand, within Dsui_2306 at 2463.405 kb on + strand, within Dsui_2306 at 2463.413 kb on - strand at 2463.628 kb on - strand, within Dsui_2307 at 2463.635 kb on + strand, within Dsui_2307 at 2463.635 kb on + strand, within Dsui_2307 at 2463.738 kb on - strand, within Dsui_2307 at 2463.746 kb on + strand, within Dsui_2307 at 2463.748 kb on - strand, within Dsui_2307 at 2463.827 kb on + strand, within Dsui_2307 at 2463.828 kb on + strand, within Dsui_2307 at 2463.898 kb on - strand, within Dsui_2307 at 2464.052 kb on + strand at 2464.060 kb on - strand, within Dsui_2307 at 2464.130 kb on + strand, within Dsui_2307 at 2464.132 kb on - strand, within Dsui_2307 at 2464.169 kb on - strand at 2464.189 kb on + strand at 2464.189 kb on + strand at 2464.194 kb on + strand at 2464.197 kb on - strand at 2464.197 kb on - strand at 2464.202 kb on - strand at 2464.231 kb on - strand at 2464.302 kb on + strand, within Dsui_2308 at 2464.304 kb on - strand, within Dsui_2308 at 2464.315 kb on - strand, within Dsui_2308 at 2464.467 kb on - strand, within Dsui_2308
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 2,462,045 + +0.4 2,462,061 - +0.1 2,462,089 - Dsui_2305 0.13 -0.5 2,462,210 - Dsui_2305 0.29 -0.7 2,462,272 - Dsui_2305 0.38 -0.6 2,462,311 - Dsui_2305 0.43 -1.0 2,462,439 - Dsui_2305 0.60 -1.2 2,462,458 - Dsui_2305 0.63 -0.9 2,462,690 + -0.4 2,462,747 + +1.7 2,462,747 + +0.2 2,462,755 - +0.3 2,462,755 - -0.3 2,462,755 - -1.1 2,462,755 - -0.8 2,462,755 - -0.1 2,462,788 + +1.1 2,462,796 - +0.2 2,462,806 + +0.6 2,462,814 - -0.2 2,462,814 - -0.2 2,462,820 + +0.3 2,462,828 - +0.5 2,462,830 + +0.4 2,462,838 - -0.1 2,462,870 - -0.2 2,463,108 + Dsui_2306 0.29 -0.7 2,463,116 - -1.1 2,463,126 - -0.6 2,463,126 - Dsui_2306 0.32 +0.3 2,463,138 + Dsui_2306 0.34 +0.1 2,463,227 + Dsui_2306 0.49 -1.1 2,463,340 + Dsui_2306 0.69 -0.8 2,463,405 + Dsui_2306 0.80 -0.4 2,463,413 - -0.6 2,463,628 - Dsui_2307 0.11 +0.4 2,463,635 + Dsui_2307 0.12 -0.1 2,463,635 + Dsui_2307 0.12 -0.0 2,463,738 - Dsui_2307 0.28 -0.1 2,463,746 + Dsui_2307 0.29 -0.1 2,463,748 - Dsui_2307 0.29 -0.0 2,463,827 + Dsui_2307 0.41 -1.3 2,463,828 + Dsui_2307 0.41 +0.5 2,463,898 - Dsui_2307 0.52 +0.2 2,464,052 + +0.7 2,464,060 - Dsui_2307 0.77 -0.3 2,464,130 + Dsui_2307 0.87 +0.1 2,464,132 - Dsui_2307 0.87 +0.4 2,464,169 - +0.1 2,464,189 + +0.9 2,464,189 + +0.3 2,464,194 + -0.1 2,464,197 - -0.2 2,464,197 - -0.1 2,464,202 - -0.6 2,464,231 - +0.3 2,464,302 + Dsui_2308 0.11 +0.1 2,464,304 - Dsui_2308 0.12 +0.2 2,464,315 - Dsui_2308 0.13 -0.1 2,464,467 - Dsui_2308 0.38 -0.7
Or see this region's nucleotide sequence