Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2251 and Dsui_2252 are separated by 18 nucleotides Dsui_2252 and Dsui_2253 are separated by 220 nucleotides
Dsui_2251: Dsui_2251 - signal transduction histidine kinase, at 2,398,675 to 2,400,147
_2251
Dsui_2252: Dsui_2252 - transcriptional regulator with HTH domain and aminotransferase domain, at 2,400,166 to 2,401,707
_2252
Dsui_2253: Dsui_2253 - benzoate transporter, at 2,401,928 to 2,403,154
_2253
Position (kb)
2400
2401
2402 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2399.258 kb on - strand, within Dsui_2251 at 2399.297 kb on + strand at 2399.525 kb on - strand, within Dsui_2251 at 2399.572 kb on - strand at 2399.612 kb on + strand, within Dsui_2251 at 2399.618 kb on + strand at 2399.709 kb on + strand, within Dsui_2251 at 2399.779 kb on - strand at 2399.808 kb on + strand, within Dsui_2251 at 2399.876 kb on + strand at 2399.978 kb on + strand, within Dsui_2251 at 2399.982 kb on - strand, within Dsui_2251 at 2399.983 kb on - strand, within Dsui_2251 at 2400.132 kb on - strand at 2400.137 kb on - strand at 2400.141 kb on + strand at 2400.149 kb on - strand at 2400.149 kb on - strand at 2400.283 kb on - strand at 2400.290 kb on + strand at 2400.507 kb on - strand, within Dsui_2252 at 2400.587 kb on + strand at 2400.617 kb on - strand, within Dsui_2252 at 2400.630 kb on + strand at 2400.687 kb on + strand, within Dsui_2252 at 2400.812 kb on - strand, within Dsui_2252 at 2400.947 kb on - strand, within Dsui_2252 at 2401.025 kb on - strand, within Dsui_2252 at 2401.100 kb on + strand, within Dsui_2252 at 2401.149 kb on - strand, within Dsui_2252 at 2401.154 kb on + strand, within Dsui_2252 at 2401.162 kb on - strand, within Dsui_2252 at 2401.541 kb on - strand, within Dsui_2252 at 2401.584 kb on + strand at 2401.634 kb on + strand at 2401.664 kb on - strand at 2401.670 kb on - strand at 2401.886 kb on + strand at 2401.920 kb on - strand at 2402.021 kb on - strand at 2402.241 kb on - strand at 2402.255 kb on - strand, within Dsui_2253 at 2402.407 kb on + strand at 2402.580 kb on - strand at 2402.677 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 2,399,258 - Dsui_2251 0.40 -0.3 2,399,297 + +0.7 2,399,525 - Dsui_2251 0.58 -0.5 2,399,572 - +1.7 2,399,612 + Dsui_2251 0.64 -0.7 2,399,618 + +2.0 2,399,709 + Dsui_2251 0.70 -1.6 2,399,779 - +0.1 2,399,808 + Dsui_2251 0.77 -1.7 2,399,876 + +3.3 2,399,978 + Dsui_2251 0.88 -0.3 2,399,982 - Dsui_2251 0.89 -0.1 2,399,983 - Dsui_2251 0.89 -0.4 2,400,132 - -0.9 2,400,137 - -2.4 2,400,141 + +1.0 2,400,149 - +0.3 2,400,149 - +0.7 2,400,283 - +0.3 2,400,290 + +0.3 2,400,507 - Dsui_2252 0.22 +2.1 2,400,587 + -0.3 2,400,617 - Dsui_2252 0.29 +0.1 2,400,630 + +2.7 2,400,687 + Dsui_2252 0.34 +0.3 2,400,812 - Dsui_2252 0.42 +0.3 2,400,947 - Dsui_2252 0.51 -0.6 2,401,025 - Dsui_2252 0.56 -2.5 2,401,100 + Dsui_2252 0.61 -1.1 2,401,149 - Dsui_2252 0.64 -0.2 2,401,154 + Dsui_2252 0.64 +0.7 2,401,162 - Dsui_2252 0.65 +1.0 2,401,541 - Dsui_2252 0.89 -0.6 2,401,584 + +0.1 2,401,634 + +2.1 2,401,664 - -0.0 2,401,670 - -0.3 2,401,886 + +0.1 2,401,920 - +0.7 2,402,021 - +1.7 2,402,241 - +0.1 2,402,255 - Dsui_2253 0.27 -1.3 2,402,407 + +0.7 2,402,580 - +0.5 2,402,677 - +0.1
Or see this region's nucleotide sequence