Strain Fitness in Dechlorosoma suillum PS around Dsui_2250
Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | rich media with hydrogen peroxide 5 mM |
---|---|---|---|---|---|
remove | |||||
2,396,369 | + | Dsui_2249 | 0.35 | +0.0 | |
2,396,461 | - | -0.6 | |||
2,396,467 | + | Dsui_2249 | 0.42 | +0.1 | |
2,396,524 | - | +1.1 | |||
2,396,539 | + | Dsui_2249 | 0.47 | +0.4 | |
2,396,539 | + | Dsui_2249 | 0.47 | -0.5 | |
2,396,539 | + | -0.3 | |||
2,396,539 | + | Dsui_2249 | 0.47 | +1.0 | |
2,396,547 | - | +1.1 | |||
2,396,547 | - | Dsui_2249 | 0.48 | +1.3 | |
2,396,547 | - | +1.7 | |||
2,396,603 | + | Dsui_2249 | 0.52 | +0.3 | |
2,396,611 | - | +0.1 | |||
2,397,113 | + | Dsui_2249 | 0.89 | +1.3 | |
2,397,114 | + | Dsui_2249 | 0.89 | -0.2 | |
2,397,206 | + | +1.7 | |||
2,397,291 | - | +1.7 | |||
2,397,301 | - | +1.7 | |||
2,397,326 | + | -0.1 | |||
2,397,365 | + | +0.5 | |||
2,397,479 | + | Dsui_2250 | 0.13 | +0.1 | |
2,397,513 | + | Dsui_2250 | 0.15 | +1.1 | |
2,397,513 | + | +0.5 | |||
2,397,999 | + | Dsui_2250 | 0.54 | -1.1 | |
2,398,056 | - | -0.3 | |||
2,398,157 | + | +0.7 | |||
2,398,251 | + | Dsui_2250 | 0.74 | -0.9 | |
2,398,260 | - | +1.7 | |||
2,398,342 | + | -0.1 | |||
2,398,432 | - | +2.7 | |||
2,398,469 | - | -0.3 | |||
2,398,596 | + | +0.5 | |||
2,398,610 | + | +0.9 | |||
2,398,611 | + | +0.1 | |||
2,398,713 | + | +0.2 | |||
2,399,148 | + | +1.3 | |||
2,399,258 | - | Dsui_2251 | 0.40 | -0.3 | |
2,399,297 | + | +0.7 | |||
2,399,525 | - | Dsui_2251 | 0.58 | -0.5 | |
2,399,572 | - | +1.7 |
Or see this region's nucleotide sequence