Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2142 and Dsui_2143 are separated by 202 nucleotides Dsui_2143 and Dsui_2144 are separated by 276 nucleotides Dsui_2144 and Dsui_2145 are separated by 213 nucleotides
Dsui_2142: Dsui_2142 - Protein of unknown function (DUF2894), at 2,271,236 to 2,272,111
_2142
Dsui_2143: Dsui_2143 - hypothetical protein, at 2,272,314 to 2,272,856
_2143
Dsui_2144: Dsui_2144 - tRNA-Ser, at 2,273,133 to 2,273,220
_2144
Dsui_2145: Dsui_2145 - FtsH-interacting integral membrane protein, at 2,273,434 to 2,274,126
_2145
Position (kb)
2272
2273 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2271.866 kb on + strand, within Dsui_2142 at 2271.877 kb on + strand, within Dsui_2142 at 2271.885 kb on - strand at 2272.006 kb on + strand at 2272.019 kb on - strand at 2272.019 kb on - strand at 2272.038 kb on - strand at 2272.184 kb on - strand at 2272.263 kb on + strand at 2272.265 kb on - strand at 2272.270 kb on + strand at 2272.278 kb on - strand at 2272.442 kb on - strand at 2272.467 kb on + strand, within Dsui_2143 at 2272.472 kb on + strand, within Dsui_2143 at 2272.475 kb on - strand at 2272.520 kb on + strand, within Dsui_2143 at 2272.679 kb on - strand at 2272.738 kb on + strand, within Dsui_2143 at 2272.757 kb on - strand at 2272.872 kb on + strand at 2272.872 kb on + strand at 2272.874 kb on + strand at 2272.911 kb on + strand at 2273.274 kb on + strand at 2273.333 kb on + strand at 2273.343 kb on + strand at 2273.343 kb on + strand at 2273.351 kb on - strand at 2273.388 kb on + strand at 2273.502 kb on + strand at 2273.751 kb on + strand, within Dsui_2145
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 2,271,866 + Dsui_2142 0.72 +1.1 2,271,877 + Dsui_2142 0.73 +0.1 2,271,885 - +0.1 2,272,006 + +0.1 2,272,019 - +0.7 2,272,019 - +0.7 2,272,038 - -0.6 2,272,184 - +1.1 2,272,263 + +0.3 2,272,265 - +1.0 2,272,270 + -1.6 2,272,278 - -0.6 2,272,442 - +0.7 2,272,467 + Dsui_2143 0.28 +1.0 2,272,472 + Dsui_2143 0.29 +1.1 2,272,475 - +0.7 2,272,520 + Dsui_2143 0.38 +0.3 2,272,679 - +2.7 2,272,738 + Dsui_2143 0.78 +0.1 2,272,757 - +0.7 2,272,872 + +0.2 2,272,872 + +0.1 2,272,874 + +0.1 2,272,911 + +2.7 2,273,274 + -0.1 2,273,333 + -0.1 2,273,343 + -2.5 2,273,343 + +0.5 2,273,351 - +2.7 2,273,388 + +0.1 2,273,502 + +0.3 2,273,751 + Dsui_2145 0.46 -0.4
Or see this region's nucleotide sequence