Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2044 and Dsui_2045 are separated by 150 nucleotides Dsui_2045 and Dsui_2046 are separated by 40 nucleotides
Dsui_2044: Dsui_2044 - Rhodanese-related sulfurtransferase, at 2,163,887 to 2,164,660
_2044
Dsui_2045: Dsui_2045 - hypothetical protein, at 2,164,811 to 2,165,128
_2045
Dsui_2046: Dsui_2046 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 2,165,169 to 2,166,848
_2046
Position (kb)
2164
2165
2166 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2163.845 kb on + strand at 2163.845 kb on + strand at 2163.853 kb on - strand at 2163.973 kb on + strand, within Dsui_2044 at 2164.025 kb on - strand, within Dsui_2044 at 2164.072 kb on - strand at 2164.075 kb on + strand, within Dsui_2044 at 2164.089 kb on + strand at 2164.114 kb on - strand at 2164.174 kb on + strand, within Dsui_2044 at 2164.259 kb on - strand at 2164.409 kb on + strand, within Dsui_2044 at 2164.761 kb on + strand at 2164.791 kb on + strand at 2164.796 kb on + strand at 2164.796 kb on + strand at 2164.796 kb on + strand at 2164.796 kb on + strand at 2164.796 kb on + strand at 2164.804 kb on - strand at 2164.869 kb on + strand at 2164.893 kb on - strand at 2164.950 kb on + strand, within Dsui_2045 at 2165.021 kb on + strand, within Dsui_2045 at 2165.047 kb on - strand, within Dsui_2045 at 2165.066 kb on + strand, within Dsui_2045 at 2165.076 kb on + strand, within Dsui_2045 at 2165.265 kb on + strand at 2165.317 kb on + strand at 2165.382 kb on + strand, within Dsui_2046 at 2165.590 kb on + strand at 2165.638 kb on - strand at 2165.640 kb on + strand at 2165.648 kb on - strand at 2165.666 kb on + strand, within Dsui_2046 at 2165.805 kb on - strand, within Dsui_2046 at 2165.831 kb on + strand, within Dsui_2046 at 2165.870 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 2,163,845 + +1.7 2,163,845 + +1.7 2,163,853 - +1.7 2,163,973 + Dsui_2044 0.11 +0.6 2,164,025 - Dsui_2044 0.18 +0.5 2,164,072 - -0.3 2,164,075 + Dsui_2044 0.24 +0.7 2,164,089 + +1.1 2,164,114 - +0.7 2,164,174 + Dsui_2044 0.37 +0.5 2,164,259 - +0.1 2,164,409 + Dsui_2044 0.67 +0.1 2,164,761 + +2.7 2,164,791 + -0.1 2,164,796 + -0.3 2,164,796 + +0.3 2,164,796 + +0.7 2,164,796 + +0.1 2,164,796 + +0.9 2,164,804 - +0.1 2,164,869 + +0.4 2,164,893 - +1.7 2,164,950 + Dsui_2045 0.44 +0.7 2,165,021 + Dsui_2045 0.66 +0.9 2,165,047 - Dsui_2045 0.74 +0.8 2,165,066 + Dsui_2045 0.80 +0.3 2,165,076 + Dsui_2045 0.83 -1.0 2,165,265 + -0.3 2,165,317 + -0.7 2,165,382 + Dsui_2046 0.13 +1.1 2,165,590 + -0.0 2,165,638 - +0.1 2,165,640 + +1.3 2,165,648 - +1.1 2,165,666 + Dsui_2046 0.30 -2.4 2,165,805 - Dsui_2046 0.38 -0.3 2,165,831 + Dsui_2046 0.39 -0.2 2,165,870 + -0.3
Or see this region's nucleotide sequence