Strain Fitness in Dechlorosoma suillum PS around Dsui_1978
Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | rich media with hydrogen peroxide 5 mM |
---|---|---|---|---|---|
remove | |||||
2,085,872 | - | +0.6 | |||
2,085,890 | + | -0.4 | |||
2,085,890 | + | +0.3 | |||
2,085,895 | + | -0.1 | |||
2,085,898 | - | +0.7 | |||
2,085,898 | - | -0.1 | |||
2,085,910 | + | +0.2 | |||
2,085,910 | + | -0.2 | |||
2,085,910 | + | +0.3 | |||
2,085,910 | + | -0.1 | |||
2,085,918 | + | -0.5 | |||
2,085,918 | + | -0.2 | |||
2,085,918 | + | -1.0 | |||
2,085,918 | + | +0.5 | |||
2,085,918 | + | +0.0 | |||
2,085,918 | - | +0.7 | |||
2,085,931 | - | +0.1 | |||
2,085,938 | + | +0.5 | |||
2,087,754 | + | Dsui_1978 | 0.78 | +0.0 | |
2,087,754 | + | Dsui_1978 | 0.78 | +0.5 | |
2,087,907 | + | -0.6 | |||
2,088,182 | - | Dsui_1979 | 0.22 | -0.1 | |
2,088,204 | - | Dsui_1979 | 0.24 | -0.2 | |
2,088,308 | - | Dsui_1979 | 0.38 | +0.3 | |
2,088,324 | + | Dsui_1979 | 0.40 | +0.4 | |
2,088,324 | + | Dsui_1979 | 0.40 | +0.5 | |
2,088,332 | - | Dsui_1979 | 0.41 | -0.2 | |
2,088,332 | - | Dsui_1979 | 0.41 | +0.4 | |
2,088,455 | + | Dsui_1979 | 0.57 | +0.1 | |
2,088,482 | + | Dsui_1979 | 0.61 | +0.6 | |
2,088,490 | - | Dsui_1979 | 0.62 | -0.9 | |
2,088,550 | + | Dsui_1979 | 0.70 | +0.1 | |
2,088,626 | + | Dsui_1979 | 0.79 | +0.5 | |
2,088,685 | - | Dsui_1979 | 0.87 | +0.1 | |
2,088,685 | - | Dsui_1979 | 0.87 | +0.5 | |
2,088,709 | + | -0.2 | |||
2,088,717 | - | +0.1 | |||
2,088,727 | + | +0.4 | |||
2,088,790 | - | +0.3 |
Or see this region's nucleotide sequence