Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1766 and Dsui_1767 are separated by 94 nucleotides Dsui_1767 and Dsui_1768 are separated by 9 nucleotides Dsui_1768 and Dsui_1769 overlap by 4 nucleotides
Dsui_1766: Dsui_1766 - hypothetical protein, at 1,853,482 to 1,853,910
_1766
Dsui_1767: Dsui_1767 - methyltransferase family protein, at 1,854,005 to 1,854,658
_1767
Dsui_1768: Dsui_1768 - WxcM-like protein, at 1,854,668 to 1,855,084
_1768
Dsui_1769: Dsui_1769 - putative PLP-dependent enzyme possibly involved in cell wall biogenesis, at 1,855,081 to 1,856,211
_1769
Position (kb)
1854
1855
1856 Strain fitness (log2 ratio)
-2
-1
0
1 at 1853.866 kb on + strand, within Dsui_1766 at 1853.928 kb on + strand at 1853.932 kb on - strand at 1853.984 kb on + strand at 1854.001 kb on + strand at 1854.001 kb on + strand at 1854.050 kb on + strand at 1854.050 kb on + strand at 1854.106 kb on + strand, within Dsui_1767 at 1854.149 kb on + strand, within Dsui_1767 at 1854.247 kb on + strand, within Dsui_1767 at 1854.272 kb on + strand, within Dsui_1767 at 1854.437 kb on + strand, within Dsui_1767 at 1854.476 kb on + strand, within Dsui_1767 at 1854.557 kb on + strand, within Dsui_1767 at 1854.596 kb on + strand at 1854.650 kb on - strand at 1854.661 kb on - strand at 1854.670 kb on + strand at 1854.705 kb on + strand at 1854.721 kb on + strand, within Dsui_1768 at 1854.735 kb on - strand, within Dsui_1768 at 1854.818 kb on + strand, within Dsui_1768 at 1854.836 kb on + strand, within Dsui_1768 at 1854.837 kb on - strand, within Dsui_1768 at 1854.842 kb on - strand, within Dsui_1768 at 1854.891 kb on + strand, within Dsui_1768 at 1854.941 kb on - strand, within Dsui_1768 at 1854.989 kb on + strand, within Dsui_1768 at 1854.998 kb on + strand, within Dsui_1768 at 1855.006 kb on - strand, within Dsui_1768 at 1855.016 kb on - strand at 1855.056 kb on + strand at 1855.059 kb on - strand at 1855.064 kb on + strand at 1855.141 kb on + strand at 1855.167 kb on - strand at 1855.169 kb on + strand at 1855.188 kb on + strand at 1855.238 kb on + strand, within Dsui_1769 at 1855.238 kb on + strand, within Dsui_1769 at 1855.243 kb on + strand, within Dsui_1769 at 1855.243 kb on + strand, within Dsui_1769 at 1855.243 kb on + strand, within Dsui_1769 at 1855.246 kb on - strand, within Dsui_1769 at 1855.246 kb on - strand, within Dsui_1769 at 1855.383 kb on + strand, within Dsui_1769 at 1855.739 kb on + strand, within Dsui_1769 at 1855.786 kb on + strand, within Dsui_1769 at 1855.797 kb on + strand, within Dsui_1769 at 1855.820 kb on + strand, within Dsui_1769 at 1855.828 kb on - strand, within Dsui_1769 at 1855.926 kb on + strand, within Dsui_1769 at 1855.934 kb on - strand, within Dsui_1769
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 1,853,866 + Dsui_1766 0.90 -0.3 1,853,928 + -0.0 1,853,932 - +0.1 1,853,984 + -0.3 1,854,001 + +0.0 1,854,001 + -0.2 1,854,050 + -0.2 1,854,050 + -0.5 1,854,106 + Dsui_1767 0.15 +0.3 1,854,149 + Dsui_1767 0.22 -0.1 1,854,247 + Dsui_1767 0.37 -0.6 1,854,272 + Dsui_1767 0.41 -0.1 1,854,437 + Dsui_1767 0.66 -0.2 1,854,476 + Dsui_1767 0.72 -0.3 1,854,557 + Dsui_1767 0.84 +0.2 1,854,596 + +0.1 1,854,650 - +0.0 1,854,661 - -0.2 1,854,670 + -0.3 1,854,705 + -0.4 1,854,721 + Dsui_1768 0.13 -1.3 1,854,735 - Dsui_1768 0.16 -0.6 1,854,818 + Dsui_1768 0.36 -0.6 1,854,836 + Dsui_1768 0.40 -0.3 1,854,837 - Dsui_1768 0.41 +0.6 1,854,842 - Dsui_1768 0.42 +0.8 1,854,891 + Dsui_1768 0.53 -0.6 1,854,941 - Dsui_1768 0.65 -0.5 1,854,989 + Dsui_1768 0.77 -0.2 1,854,998 + Dsui_1768 0.79 +0.0 1,855,006 - Dsui_1768 0.81 +0.5 1,855,016 - +0.7 1,855,056 + -0.3 1,855,059 - -0.3 1,855,064 + -1.0 1,855,141 + -0.2 1,855,167 - -0.5 1,855,169 + -0.3 1,855,188 + -0.3 1,855,238 + Dsui_1769 0.14 -0.3 1,855,238 + Dsui_1769 0.14 -0.1 1,855,243 + Dsui_1769 0.14 -0.4 1,855,243 + Dsui_1769 0.14 -0.6 1,855,243 + Dsui_1769 0.14 -0.0 1,855,246 - Dsui_1769 0.15 -0.8 1,855,246 - Dsui_1769 0.15 +0.0 1,855,383 + Dsui_1769 0.27 -0.4 1,855,739 + Dsui_1769 0.58 -0.0 1,855,786 + Dsui_1769 0.62 +0.4 1,855,797 + Dsui_1769 0.63 -0.9 1,855,820 + Dsui_1769 0.65 +0.6 1,855,828 - Dsui_1769 0.66 -0.3 1,855,926 + Dsui_1769 0.75 -0.2 1,855,934 - Dsui_1769 0.75 -2.0
Or see this region's nucleotide sequence