Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1710 and Dsui_1711 are separated by 72 nucleotides Dsui_1711 and Dsui_1712 overlap by 26 nucleotides Dsui_1712 and Dsui_1713 are separated by 6 nucleotides
Dsui_1710: Dsui_1710 - PAS domain S-box, at 1,797,468 to 1,800,335
_1710
Dsui_1711: Dsui_1711 - methylase of chemotaxis methyl-accepting protein, at 1,800,408 to 1,801,286
_1711
Dsui_1712: Dsui_1712 - chemotaxis protein, at 1,801,261 to 1,801,908
_1712
Dsui_1713: Dsui_1713 - chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain, at 1,801,915 to 1,802,940
_1713
Position (kb)
1801
1802 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1800.296 kb on - strand at 1800.329 kb on + strand at 1800.413 kb on - strand at 1800.627 kb on - strand at 1800.724 kb on - strand at 1800.734 kb on - strand at 1800.739 kb on + strand, within Dsui_1711 at 1800.845 kb on - strand, within Dsui_1711 at 1800.959 kb on + strand, within Dsui_1711 at 1800.967 kb on - strand, within Dsui_1711 at 1800.999 kb on + strand, within Dsui_1711 at 1800.999 kb on + strand, within Dsui_1711 at 1800.999 kb on + strand, within Dsui_1711 at 1800.999 kb on + strand, within Dsui_1711 at 1801.007 kb on - strand, within Dsui_1711 at 1801.193 kb on - strand, within Dsui_1711 at 1801.267 kb on - strand at 1801.395 kb on - strand, within Dsui_1712 at 1801.511 kb on - strand, within Dsui_1712 at 1801.527 kb on + strand, within Dsui_1712 at 1801.611 kb on + strand, within Dsui_1712 at 1801.780 kb on - strand, within Dsui_1712 at 1801.823 kb on + strand, within Dsui_1712 at 1801.861 kb on + strand at 1801.869 kb on - strand at 1801.905 kb on - strand at 1801.917 kb on + strand at 1801.955 kb on + strand at 1802.076 kb on + strand, within Dsui_1713 at 1802.110 kb on - strand, within Dsui_1713 at 1802.110 kb on - strand, within Dsui_1713 at 1802.238 kb on + strand, within Dsui_1713 at 1802.278 kb on - strand, within Dsui_1713 at 1802.579 kb on - strand, within Dsui_1713 at 1802.635 kb on - strand, within Dsui_1713 at 1802.655 kb on + strand, within Dsui_1713 at 1802.692 kb on + strand, within Dsui_1713 at 1802.740 kb on - strand, within Dsui_1713 at 1802.834 kb on + strand, within Dsui_1713 at 1802.847 kb on - strand at 1802.863 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 1,800,296 - -1.5 1,800,329 + +0.2 1,800,413 - +1.7 1,800,627 - +0.7 1,800,724 - -0.9 1,800,734 - +0.4 1,800,739 + Dsui_1711 0.38 +0.3 1,800,845 - Dsui_1711 0.50 -0.1 1,800,959 + Dsui_1711 0.63 -0.1 1,800,967 - Dsui_1711 0.64 -0.9 1,800,999 + Dsui_1711 0.67 -0.2 1,800,999 + Dsui_1711 0.67 +0.1 1,800,999 + Dsui_1711 0.67 +0.9 1,800,999 + Dsui_1711 0.67 +0.1 1,801,007 - Dsui_1711 0.68 +0.2 1,801,193 - Dsui_1711 0.89 -0.4 1,801,267 - -1.7 1,801,395 - Dsui_1712 0.21 -0.0 1,801,511 - Dsui_1712 0.39 +0.4 1,801,527 + Dsui_1712 0.41 +0.4 1,801,611 + Dsui_1712 0.54 +0.1 1,801,780 - Dsui_1712 0.80 +1.1 1,801,823 + Dsui_1712 0.87 +1.0 1,801,861 + +0.2 1,801,869 - +1.0 1,801,905 - +2.7 1,801,917 + +0.2 1,801,955 + -0.2 1,802,076 + Dsui_1713 0.16 +0.4 1,802,110 - Dsui_1713 0.19 +1.5 1,802,110 - Dsui_1713 0.19 +0.7 1,802,238 + Dsui_1713 0.31 +0.3 1,802,278 - Dsui_1713 0.35 +1.0 1,802,579 - Dsui_1713 0.65 -0.1 1,802,635 - Dsui_1713 0.70 -2.2 1,802,655 + Dsui_1713 0.72 +0.3 1,802,692 + Dsui_1713 0.76 +1.4 1,802,740 - Dsui_1713 0.80 +0.9 1,802,834 + Dsui_1713 0.90 +0.7 1,802,847 - -0.1 1,802,863 + -0.6
Or see this region's nucleotide sequence