Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1650 and Dsui_1651 are separated by 153 nucleotides Dsui_1651 and Dsui_1652 are separated by 77 nucleotides Dsui_1652 and Dsui_1653 overlap by 4 nucleotides Dsui_1653 and Dsui_1654 are separated by 348 nucleotides
Dsui_1650: Dsui_1650 - copper/silver-translocating P-type ATPase, at 1,731,202 to 1,733,637
_1650
Dsui_1651: Dsui_1651 - copper chaperone, at 1,733,791 to 1,733,997
_1651
Dsui_1652: Dsui_1652 - FeoA-like protein, at 1,734,075 to 1,734,326
_1652
Dsui_1653: Dsui_1653 - ferrous iron transporter FeoB, at 1,734,323 to 1,736,323
_1653
Dsui_1654: Dsui_1654 - hypothetical protein, at 1,736,672 to 1,738,099
_1654
Position (kb)
1734
1735
1736
1737 Strain fitness (log2 ratio)
-1
0
1
2 at 1733.424 kb on + strand at 1733.431 kb on + strand at 1733.432 kb on - strand at 1733.439 kb on - strand at 1733.479 kb on + strand at 1733.522 kb on - strand at 1733.557 kb on - strand at 1733.557 kb on - strand at 1733.663 kb on + strand at 1733.844 kb on + strand, within Dsui_1651 at 1733.944 kb on + strand, within Dsui_1651 at 1734.006 kb on + strand at 1734.138 kb on - strand, within Dsui_1652 at 1734.211 kb on + strand, within Dsui_1652 at 1734.411 kb on + strand at 1734.529 kb on + strand, within Dsui_1653 at 1734.537 kb on - strand, within Dsui_1653 at 1734.768 kb on - strand, within Dsui_1653 at 1734.773 kb on - strand, within Dsui_1653 at 1734.828 kb on - strand, within Dsui_1653 at 1734.828 kb on - strand, within Dsui_1653 at 1734.835 kb on + strand at 1734.875 kb on + strand, within Dsui_1653 at 1734.883 kb on - strand, within Dsui_1653 at 1734.941 kb on + strand, within Dsui_1653 at 1735.031 kb on + strand, within Dsui_1653 at 1735.031 kb on + strand, within Dsui_1653 at 1735.037 kb on + strand at 1735.218 kb on - strand, within Dsui_1653 at 1735.341 kb on - strand, within Dsui_1653 at 1735.384 kb on - strand, within Dsui_1653 at 1735.411 kb on - strand, within Dsui_1653 at 1735.490 kb on - strand, within Dsui_1653 at 1735.495 kb on - strand, within Dsui_1653 at 1735.770 kb on - strand, within Dsui_1653 at 1735.847 kb on + strand at 1735.971 kb on - strand, within Dsui_1653 at 1736.083 kb on + strand, within Dsui_1653 at 1736.091 kb on - strand, within Dsui_1653 at 1736.178 kb on - strand at 1736.240 kb on - strand at 1736.249 kb on + strand at 1736.389 kb on + strand at 1736.402 kb on - strand at 1736.447 kb on - strand at 1736.529 kb on + strand at 1736.855 kb on + strand, within Dsui_1654 at 1736.874 kb on + strand, within Dsui_1654 at 1736.882 kb on - strand, within Dsui_1654 at 1736.892 kb on - strand, within Dsui_1654 at 1737.097 kb on + strand, within Dsui_1654 at 1737.097 kb on + strand, within Dsui_1654 at 1737.103 kb on + strand, within Dsui_1654 at 1737.156 kb on - strand, within Dsui_1654 at 1737.279 kb on + strand, within Dsui_1654 at 1737.289 kb on + strand, within Dsui_1654
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 1,733,424 + +0.2 1,733,431 + +0.8 1,733,432 - +0.3 1,733,439 - +0.2 1,733,479 + +0.5 1,733,522 - +1.7 1,733,557 - -0.6 1,733,557 - -0.7 1,733,663 + +0.3 1,733,844 + Dsui_1651 0.26 +0.3 1,733,944 + Dsui_1651 0.74 +0.4 1,734,006 + +0.2 1,734,138 - Dsui_1652 0.25 +0.8 1,734,211 + Dsui_1652 0.54 +0.9 1,734,411 + -0.6 1,734,529 + Dsui_1653 0.10 -0.8 1,734,537 - Dsui_1653 0.11 +0.0 1,734,768 - Dsui_1653 0.22 +2.1 1,734,773 - Dsui_1653 0.22 +0.4 1,734,828 - Dsui_1653 0.25 +0.6 1,734,828 - Dsui_1653 0.25 +1.4 1,734,835 + +0.7 1,734,875 + Dsui_1653 0.28 +1.3 1,734,883 - Dsui_1653 0.28 +0.9 1,734,941 + Dsui_1653 0.31 +0.0 1,735,031 + Dsui_1653 0.35 -0.3 1,735,031 + Dsui_1653 0.35 +0.4 1,735,037 + +0.7 1,735,218 - Dsui_1653 0.45 +0.0 1,735,341 - Dsui_1653 0.51 +1.0 1,735,384 - Dsui_1653 0.53 +0.2 1,735,411 - Dsui_1653 0.54 +2.0 1,735,490 - Dsui_1653 0.58 -0.0 1,735,495 - Dsui_1653 0.59 -0.3 1,735,770 - Dsui_1653 0.72 +0.4 1,735,847 + -1.5 1,735,971 - Dsui_1653 0.82 +1.1 1,736,083 + Dsui_1653 0.88 +0.5 1,736,091 - Dsui_1653 0.88 +0.6 1,736,178 - +0.3 1,736,240 - +1.8 1,736,249 + -0.2 1,736,389 + +0.9 1,736,402 - +0.6 1,736,447 - +0.3 1,736,529 + +0.6 1,736,855 + Dsui_1654 0.13 +0.5 1,736,874 + Dsui_1654 0.14 -0.3 1,736,882 - Dsui_1654 0.15 +0.3 1,736,892 - Dsui_1654 0.15 -0.1 1,737,097 + Dsui_1654 0.30 +0.1 1,737,097 + Dsui_1654 0.30 -0.9 1,737,103 + Dsui_1654 0.30 +1.4 1,737,156 - Dsui_1654 0.34 +0.6 1,737,279 + Dsui_1654 0.43 +0.4 1,737,289 + Dsui_1654 0.43 -0.5
Or see this region's nucleotide sequence