Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1494 and Dsui_1495 are separated by 78 nucleotides Dsui_1495 and Dsui_1496 are separated by 22 nucleotides
Dsui_1494: Dsui_1494 - ATP-dependent metalloprotease FtsH, at 1,557,905 to 1,559,734
_1494
Dsui_1495: Dsui_1495 - molecular chaperone (small heat shock protein), at 1,559,813 to 1,560,271
_1495
Dsui_1496: Dsui_1496 - YfdX protein, at 1,560,294 to 1,561,208
_1496
Position (kb)
1559
1560
1561 Strain fitness (log2 ratio)
-1
0
1 at 1558.911 kb on + strand, within Dsui_1494 at 1558.919 kb on - strand, within Dsui_1494 at 1558.956 kb on + strand, within Dsui_1494 at 1559.002 kb on - strand, within Dsui_1494 at 1559.171 kb on + strand, within Dsui_1494 at 1559.179 kb on - strand, within Dsui_1494 at 1559.262 kb on - strand, within Dsui_1494 at 1559.262 kb on - strand, within Dsui_1494 at 1559.264 kb on + strand, within Dsui_1494 at 1559.543 kb on + strand, within Dsui_1494 at 1559.743 kb on + strand at 1559.748 kb on + strand at 1559.769 kb on - strand at 1559.994 kb on + strand, within Dsui_1495 at 1560.170 kb on - strand, within Dsui_1495 at 1560.220 kb on + strand, within Dsui_1495 at 1560.228 kb on - strand at 1560.228 kb on - strand at 1560.292 kb on - strand at 1560.306 kb on - strand at 1560.308 kb on + strand at 1560.326 kb on - strand at 1560.366 kb on + strand at 1560.366 kb on + strand at 1560.374 kb on - strand at 1560.374 kb on - strand at 1560.374 kb on - strand at 1560.420 kb on - strand, within Dsui_1496 at 1560.557 kb on + strand, within Dsui_1496 at 1560.657 kb on - strand, within Dsui_1496 at 1560.657 kb on - strand, within Dsui_1496 at 1560.691 kb on - strand, within Dsui_1496 at 1560.728 kb on + strand, within Dsui_1496 at 1560.889 kb on - strand, within Dsui_1496 at 1560.911 kb on + strand, within Dsui_1496 at 1560.915 kb on - strand, within Dsui_1496 at 1561.020 kb on + strand, within Dsui_1496 at 1561.022 kb on + strand, within Dsui_1496 at 1561.022 kb on + strand, within Dsui_1496 at 1561.022 kb on + strand, within Dsui_1496 at 1561.030 kb on - strand, within Dsui_1496 at 1561.061 kb on - strand, within Dsui_1496 at 1561.070 kb on + strand, within Dsui_1496 at 1561.078 kb on - strand, within Dsui_1496 at 1561.078 kb on - strand, within Dsui_1496 at 1561.091 kb on + strand, within Dsui_1496 at 1561.126 kb on - strand at 1561.168 kb on + strand at 1561.241 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 1,558,911 + Dsui_1494 0.55 -0.2 1,558,919 - Dsui_1494 0.55 +0.0 1,558,956 + Dsui_1494 0.57 -0.1 1,559,002 - Dsui_1494 0.60 -0.8 1,559,171 + Dsui_1494 0.69 +0.7 1,559,179 - Dsui_1494 0.70 -0.1 1,559,262 - Dsui_1494 0.74 -0.3 1,559,262 - Dsui_1494 0.74 +1.1 1,559,264 + Dsui_1494 0.74 +0.4 1,559,543 + Dsui_1494 0.90 -0.2 1,559,743 + -0.9 1,559,748 + -0.2 1,559,769 - +0.7 1,559,994 + Dsui_1495 0.39 -0.8 1,560,170 - Dsui_1495 0.78 +0.0 1,560,220 + Dsui_1495 0.89 -0.3 1,560,228 - +0.7 1,560,228 - +0.8 1,560,292 - -0.0 1,560,306 - +0.3 1,560,308 + -0.3 1,560,326 - +0.5 1,560,366 + +0.2 1,560,366 + -0.0 1,560,374 - -0.5 1,560,374 - -0.2 1,560,374 - -0.3 1,560,420 - Dsui_1496 0.14 -0.1 1,560,557 + Dsui_1496 0.29 -0.4 1,560,657 - Dsui_1496 0.40 -0.1 1,560,657 - Dsui_1496 0.40 -0.0 1,560,691 - Dsui_1496 0.43 +0.9 1,560,728 + Dsui_1496 0.47 -0.2 1,560,889 - Dsui_1496 0.65 -0.0 1,560,911 + Dsui_1496 0.67 +0.0 1,560,915 - Dsui_1496 0.68 -0.6 1,561,020 + Dsui_1496 0.79 -0.6 1,561,022 + Dsui_1496 0.80 -0.1 1,561,022 + Dsui_1496 0.80 +0.0 1,561,022 + Dsui_1496 0.80 +0.1 1,561,030 - Dsui_1496 0.80 +0.7 1,561,061 - Dsui_1496 0.84 -0.3 1,561,070 + Dsui_1496 0.85 -0.2 1,561,078 - Dsui_1496 0.86 -0.6 1,561,078 - Dsui_1496 0.86 -0.8 1,561,091 + Dsui_1496 0.87 +0.3 1,561,126 - +0.5 1,561,168 + +0.0 1,561,241 + -0.2
Or see this region's nucleotide sequence