Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1463 and Dsui_1464 are separated by 300 nucleotides Dsui_1464 and Dsui_1465 are separated by 102 nucleotides
Dsui_1463: Dsui_1463 - transcriptional activator of acetoin/glycerol metabolism, at 1,522,506 to 1,524,446
_1463
Dsui_1464: Dsui_1464 - NAD-dependent aldehyde dehydrogenase, at 1,524,747 to 1,526,267
_1464
Dsui_1465: Dsui_1465 - hypothetical protein, at 1,526,370 to 1,527,881
_1465
Position (kb)
1524
1525
1526
1527 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1523.832 kb on + strand at 1523.863 kb on - strand at 1523.863 kb on - strand at 1523.939 kb on + strand, within Dsui_1463 at 1524.023 kb on - strand, within Dsui_1463 at 1524.025 kb on + strand, within Dsui_1463 at 1524.083 kb on - strand at 1524.175 kb on + strand, within Dsui_1463 at 1524.183 kb on - strand at 1524.195 kb on - strand, within Dsui_1463 at 1524.216 kb on - strand, within Dsui_1463 at 1524.302 kb on + strand at 1524.520 kb on + strand at 1524.540 kb on - strand at 1524.540 kb on - strand at 1524.715 kb on + strand at 1524.718 kb on - strand at 1524.783 kb on + strand at 1524.867 kb on + strand at 1524.883 kb on + strand at 1524.889 kb on - strand at 1524.890 kb on - strand at 1525.061 kb on - strand, within Dsui_1464 at 1525.206 kb on + strand, within Dsui_1464 at 1525.243 kb on + strand, within Dsui_1464 at 1525.380 kb on - strand at 1525.391 kb on + strand, within Dsui_1464 at 1525.500 kb on + strand, within Dsui_1464 at 1525.525 kb on + strand at 1525.533 kb on - strand at 1525.533 kb on - strand, within Dsui_1464 at 1525.533 kb on - strand, within Dsui_1464 at 1525.533 kb on - strand at 1525.612 kb on + strand, within Dsui_1464 at 1525.627 kb on + strand, within Dsui_1464 at 1525.627 kb on + strand, within Dsui_1464 at 1525.652 kb on - strand, within Dsui_1464 at 1525.718 kb on + strand at 1525.718 kb on + strand, within Dsui_1464 at 1525.726 kb on - strand, within Dsui_1464 at 1525.744 kb on - strand, within Dsui_1464 at 1525.830 kb on - strand at 1525.844 kb on + strand, within Dsui_1464 at 1525.892 kb on - strand, within Dsui_1464 at 1525.913 kb on + strand, within Dsui_1464 at 1525.928 kb on - strand, within Dsui_1464 at 1526.033 kb on - strand, within Dsui_1464 at 1526.113 kb on - strand, within Dsui_1464 at 1526.113 kb on - strand, within Dsui_1464 at 1526.217 kb on + strand at 1526.242 kb on + strand at 1526.517 kb on + strand at 1526.564 kb on - strand, within Dsui_1465 at 1526.606 kb on + strand at 1526.606 kb on + strand, within Dsui_1465 at 1526.614 kb on - strand, within Dsui_1465 at 1526.697 kb on - strand, within Dsui_1465 at 1526.898 kb on + strand, within Dsui_1465 at 1527.013 kb on + strand at 1527.014 kb on + strand, within Dsui_1465 at 1527.147 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 1,523,832 + +1.3 1,523,863 - +0.9 1,523,863 - +0.4 1,523,939 + Dsui_1463 0.74 -0.1 1,524,023 - Dsui_1463 0.78 -0.6 1,524,025 + Dsui_1463 0.78 -0.1 1,524,083 - +2.4 1,524,175 + Dsui_1463 0.86 +1.0 1,524,183 - +0.7 1,524,195 - Dsui_1463 0.87 -1.1 1,524,216 - Dsui_1463 0.88 +0.2 1,524,302 + -0.1 1,524,520 + +0.1 1,524,540 - +0.1 1,524,540 - +0.1 1,524,715 + +0.0 1,524,718 - +1.1 1,524,783 + +1.7 1,524,867 + +0.1 1,524,883 + +0.5 1,524,889 - +0.4 1,524,890 - +0.8 1,525,061 - Dsui_1464 0.21 -1.3 1,525,206 + Dsui_1464 0.30 -1.3 1,525,243 + Dsui_1464 0.33 -0.9 1,525,380 - -1.1 1,525,391 + Dsui_1464 0.42 -0.2 1,525,500 + Dsui_1464 0.50 +0.7 1,525,525 + +1.7 1,525,533 - +1.7 1,525,533 - Dsui_1464 0.52 -1.1 1,525,533 - Dsui_1464 0.52 -2.1 1,525,533 - +1.7 1,525,612 + Dsui_1464 0.57 +0.5 1,525,627 + Dsui_1464 0.58 +0.3 1,525,627 + Dsui_1464 0.58 +0.9 1,525,652 - Dsui_1464 0.60 -0.2 1,525,718 + +2.7 1,525,718 + Dsui_1464 0.64 +0.9 1,525,726 - Dsui_1464 0.64 +0.3 1,525,744 - Dsui_1464 0.66 -1.1 1,525,830 - +1.7 1,525,844 + Dsui_1464 0.72 +0.1 1,525,892 - Dsui_1464 0.75 +0.5 1,525,913 + Dsui_1464 0.77 +0.0 1,525,928 - Dsui_1464 0.78 -0.8 1,526,033 - Dsui_1464 0.85 -0.1 1,526,113 - Dsui_1464 0.90 -0.6 1,526,113 - Dsui_1464 0.90 +0.5 1,526,217 + +0.5 1,526,242 + +1.1 1,526,517 + -1.2 1,526,564 - Dsui_1465 0.13 +0.1 1,526,606 + -0.3 1,526,606 + Dsui_1465 0.16 +0.3 1,526,614 - Dsui_1465 0.16 +0.3 1,526,697 - Dsui_1465 0.22 -0.6 1,526,898 + Dsui_1465 0.35 -0.0 1,527,013 + +1.7 1,527,014 + Dsui_1465 0.43 -0.3 1,527,147 - +2.1
Or see this region's nucleotide sequence