Strain Fitness in Dechlorosoma suillum PS around Dsui_1451
Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | rich media with hydrogen peroxide 5 mM |
---|---|---|---|---|---|
remove | |||||
1,506,904 | - | +0.0 | |||
1,506,904 | - | +0.1 | |||
1,507,025 | + | -0.3 | |||
1,507,547 | + | Dsui_1450 | 0.64 | +1.1 | |
1,507,631 | + | Dsui_1450 | 0.74 | +1.1 | |
1,507,855 | + | +0.3 | |||
1,507,863 | - | +1.7 | |||
1,507,969 | - | Dsui_1451 | 0.14 | -0.2 | |
1,508,005 | + | Dsui_1451 | 0.19 | -0.3 | |
1,508,036 | + | Dsui_1451 | 0.23 | -0.9 | |
1,508,036 | + | Dsui_1451 | 0.23 | +0.5 | |
1,508,041 | + | Dsui_1451 | 0.24 | +0.1 | |
1,508,058 | - | -1.1 | |||
1,508,410 | - | Dsui_1451 | 0.75 | -0.2 | |
1,508,587 | + | -0.2 | |||
1,508,682 | - | -0.3 | |||
1,508,689 | + | +0.2 | |||
1,508,697 | - | +1.1 | |||
1,509,164 | - | Dsui_1452 | 0.24 | +0.9 | |
1,509,493 | + | Dsui_1452 | 0.39 | +0.1 |
Or see this region's nucleotide sequence