Strain Fitness in Dechlorosoma suillum PS around Dsui_1446
Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | rich media with hydrogen peroxide 5 mM |
---|---|---|---|---|---|
remove | |||||
1,500,643 | + | Dsui_1445 | 0.30 | -0.7 | |
1,500,643 | + | Dsui_1445 | 0.30 | -0.4 | |
1,500,643 | + | Dsui_1445 | 0.30 | -1.8 | |
1,500,651 | - | Dsui_1445 | 0.31 | -0.9 | |
1,500,770 | + | Dsui_1445 | 0.41 | -0.3 | |
1,500,923 | - | Dsui_1445 | 0.54 | -0.3 | |
1,501,115 | + | Dsui_1445 | 0.71 | -1.7 | |
1,501,123 | - | Dsui_1445 | 0.72 | -1.2 | |
1,501,229 | - | Dsui_1445 | 0.81 | -1.5 | |
1,501,412 | + | -1.6 | |||
1,501,448 | + | -0.5 | |||
1,501,448 | + | -1.4 | |||
1,501,456 | - | -0.7 | |||
1,501,493 | + | -0.5 | |||
1,501,493 | + | -1.0 | |||
1,501,628 | + | Dsui_1446 | 0.18 | -0.4 | |
1,501,861 | + | Dsui_1446 | 0.44 | +0.3 | |
1,501,869 | - | Dsui_1446 | 0.45 | -1.5 | |
1,502,006 | + | Dsui_1446 | 0.60 | -1.1 | |
1,502,052 | - | Dsui_1446 | 0.66 | -1.6 | |
1,502,261 | - | Dsui_1446 | 0.89 | -0.2 | |
1,502,502 | - | +0.7 | |||
1,502,523 | - | -1.8 | |||
1,502,540 | + | -0.1 | |||
1,502,628 | - | -0.1 | |||
1,502,686 | + | Dsui_1447 | 0.16 | -1.0 | |
1,502,744 | - | Dsui_1447 | 0.24 | -0.3 | |
1,502,761 | - | Dsui_1447 | 0.27 | -0.2 | |
1,502,793 | + | Dsui_1447 | 0.31 | +0.0 | |
1,502,898 | - | Dsui_1447 | 0.46 | -0.0 | |
1,502,898 | - | Dsui_1447 | 0.46 | +0.0 |
Or see this region's nucleotide sequence