Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1320 and Dsui_1321 are separated by 275 nucleotides Dsui_1321 and Dsui_1322 are separated by 45 nucleotides
Dsui_1320: Dsui_1320 - type IV-A pilus assembly ATPase PilB, at 1,378,521 to 1,380,239
_1320
Dsui_1321: Dsui_1321 - ABC-type uncharacterized transport system, permease component, at 1,380,515 to 1,381,354
_1321
Dsui_1322: Dsui_1322 - signal recognition particle protein, at 1,381,400 to 1,382,755
_1322
Position (kb)
1380
1381
1382 Strain fitness (log2 ratio)
-1
0
1 at 1379.681 kb on - strand, within Dsui_1320 at 1379.688 kb on - strand, within Dsui_1320 at 1379.704 kb on - strand, within Dsui_1320 at 1379.719 kb on + strand, within Dsui_1320 at 1379.719 kb on + strand, within Dsui_1320 at 1379.719 kb on + strand, within Dsui_1320 at 1379.719 kb on + strand, within Dsui_1320 at 1379.732 kb on - strand, within Dsui_1320 at 1379.762 kb on - strand, within Dsui_1320 at 1379.762 kb on - strand, within Dsui_1320 at 1379.853 kb on + strand, within Dsui_1320 at 1379.866 kb on - strand, within Dsui_1320 at 1379.978 kb on + strand, within Dsui_1320 at 1380.087 kb on + strand at 1380.146 kb on - strand at 1380.160 kb on + strand at 1380.161 kb on - strand at 1380.167 kb on - strand at 1380.178 kb on + strand at 1380.178 kb on - strand at 1380.184 kb on + strand at 1380.184 kb on + strand at 1380.186 kb on - strand at 1380.192 kb on - strand at 1380.210 kb on + strand at 1380.218 kb on - strand at 1380.250 kb on - strand at 1380.257 kb on + strand at 1380.372 kb on - strand at 1380.381 kb on + strand at 1380.389 kb on - strand at 1380.466 kb on - strand at 1380.466 kb on - strand at 1380.466 kb on - strand at 1380.599 kb on + strand, within Dsui_1321 at 1380.599 kb on + strand, within Dsui_1321 at 1380.774 kb on - strand, within Dsui_1321 at 1380.990 kb on - strand, within Dsui_1321 at 1381.038 kb on + strand, within Dsui_1321 at 1381.116 kb on - strand, within Dsui_1321 at 1381.116 kb on - strand, within Dsui_1321 at 1381.128 kb on - strand, within Dsui_1321
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 1,379,681 - Dsui_1320 0.67 -0.5 1,379,688 - Dsui_1320 0.68 -0.4 1,379,704 - Dsui_1320 0.69 -0.0 1,379,719 + Dsui_1320 0.70 +0.4 1,379,719 + Dsui_1320 0.70 +0.1 1,379,719 + Dsui_1320 0.70 +0.1 1,379,719 + Dsui_1320 0.70 -0.1 1,379,732 - Dsui_1320 0.70 +0.1 1,379,762 - Dsui_1320 0.72 -0.3 1,379,762 - Dsui_1320 0.72 +0.1 1,379,853 + Dsui_1320 0.77 -1.0 1,379,866 - Dsui_1320 0.78 +0.1 1,379,978 + Dsui_1320 0.85 -0.4 1,380,087 + -1.1 1,380,146 - -0.2 1,380,160 + +0.1 1,380,161 - -0.0 1,380,167 - +0.0 1,380,178 + -0.4 1,380,178 - -0.1 1,380,184 + -0.1 1,380,184 + +0.2 1,380,186 - -0.0 1,380,192 - -0.4 1,380,210 + +0.2 1,380,218 - -0.2 1,380,250 - +0.2 1,380,257 + -0.4 1,380,372 - -0.2 1,380,381 + -0.2 1,380,389 - -0.7 1,380,466 - +0.0 1,380,466 - -1.6 1,380,466 - -0.4 1,380,599 + Dsui_1321 0.10 -0.5 1,380,599 + Dsui_1321 0.10 -1.0 1,380,774 - Dsui_1321 0.31 -0.2 1,380,990 - Dsui_1321 0.57 -0.2 1,381,038 + Dsui_1321 0.62 -0.3 1,381,116 - Dsui_1321 0.72 -0.6 1,381,116 - Dsui_1321 0.72 -1.0 1,381,128 - Dsui_1321 0.73 -0.2
Or see this region's nucleotide sequence