Strain Fitness in Dechlorosoma suillum PS around Dsui_1314
Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | rich media with hydrogen peroxide 5 mM |
---|---|---|---|---|---|
remove | |||||
1,372,206 | - | -0.2 | |||
1,372,314 | + | +2.7 | |||
1,372,356 | + | +0.9 | |||
1,372,356 | + | +0.1 | |||
1,372,360 | - | Dsui_1312 | 0.23 | -0.5 | |
1,372,402 | - | Dsui_1312 | 0.32 | -0.3 | |
1,372,422 | + | +0.7 | |||
1,372,489 | - | Dsui_1312 | 0.51 | +0.5 | |
1,372,492 | + | Dsui_1312 | 0.51 | +0.2 | |
1,372,647 | + | Dsui_1312 | 0.84 | +0.5 | |
1,372,649 | + | Dsui_1312 | 0.85 | -0.2 | |
1,372,649 | - | Dsui_1312 | 0.85 | +0.3 | |
1,372,789 | - | Dsui_1313 | 0.16 | -0.6 | |
1,372,824 | + | +0.7 | |||
1,372,837 | - | Dsui_1313 | 0.27 | +1.4 | |
1,372,837 | - | Dsui_1313 | 0.27 | -1.6 | |
1,372,856 | - | Dsui_1313 | 0.31 | -0.3 | |
1,372,879 | + | +1.7 | |||
1,372,896 | + | Dsui_1313 | 0.40 | +0.7 | |
1,372,904 | - | Dsui_1313 | 0.42 | +0.0 | |
1,372,904 | - | Dsui_1313 | 0.42 | -0.9 | |
1,372,904 | - | Dsui_1313 | 0.42 | +0.0 | |
1,372,904 | - | Dsui_1313 | 0.42 | -0.3 | |
1,372,909 | - | Dsui_1313 | 0.43 | -1.3 | |
1,373,110 | + | Dsui_1313 | 0.88 | +0.9 | |
1,373,110 | + | +0.1 | |||
1,373,118 | - | -0.1 | |||
1,373,298 | + | +1.7 | |||
1,373,305 | + | Dsui_1314 | 0.35 | -0.1 | |
1,373,320 | + | +1.7 | |||
1,373,375 | - | Dsui_1314 | 0.53 | -0.6 | |
1,373,393 | + | Dsui_1314 | 0.58 | -0.9 | |
1,373,394 | + | +0.9 | |||
1,373,571 | + | +0.0 | |||
1,373,579 | - | +0.8 |
Or see this region's nucleotide sequence