Strain Fitness in Dechlorosoma suillum PS around Dsui_1269

Experiment: rich media with hydrogen peroxide 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1267 and Dsui_1268 are separated by 124 nucleotidesDsui_1268 and Dsui_1269 are separated by 124 nucleotidesDsui_1269 and Dsui_1270 are separated by 33 nucleotides Dsui_1267: Dsui_1267 - riboflavin biosynthesis protein RibD, at 1,330,399 to 1,331,496 _1267 Dsui_1268: Dsui_1268 - dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis, at 1,331,621 to 1,332,370 _1268 Dsui_1269: Dsui_1269 - hypothetical protein, at 1,332,495 to 1,332,917 _1269 Dsui_1270: Dsui_1270 - C-terminal processing peptidase, at 1,332,951 to 1,334,354 _1270 Position (kb) 1332 1333Strain fitness (log2 ratio) -1 0 1at 1332.478 kb on - strandat 1332.573 kb on - strand, within Dsui_1269at 1332.605 kb on + strand, within Dsui_1269at 1332.620 kb on + strand, within Dsui_1269at 1332.629 kb on + strand, within Dsui_1269at 1332.647 kb on - strand, within Dsui_1269at 1332.653 kb on + strandat 1332.716 kb on + strand, within Dsui_1269at 1332.748 kb on - strand, within Dsui_1269at 1332.949 kb on + strandat 1332.987 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM
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1,332,478 - +0.4
1,332,573 - Dsui_1269 0.18 +0.7
1,332,605 + Dsui_1269 0.26 +0.1
1,332,620 + Dsui_1269 0.30 +0.2
1,332,629 + Dsui_1269 0.32 -0.5
1,332,647 - Dsui_1269 0.36 +0.9
1,332,653 + +1.3
1,332,716 + Dsui_1269 0.52 +0.2
1,332,748 - Dsui_1269 0.60 +1.2
1,332,949 + -0.4
1,332,987 - +1.0

Or see this region's nucleotide sequence