Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1096 and Dsui_1097 are separated by 0 nucleotides Dsui_1097 and Dsui_1098 are separated by 108 nucleotides Dsui_1098 and Dsui_1099 are separated by 57 nucleotides
Dsui_1096: Dsui_1096 - glutamate synthase family protein, at 1,135,263 to 1,139,960
_1096
Dsui_1097: Dsui_1097 - NADH/NADPH-dependent glutamate synthase small subunit, at 1,139,961 to 1,141,427
_1097
Dsui_1098: Dsui_1098 - hypothetical protein, at 1,141,536 to 1,142,249
_1098
Dsui_1099: Dsui_1099 - UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase, at 1,142,307 to 1,143,665
_1099
Position (kb)
1139
1140
1141
1142 Strain fitness (log2 ratio)
-2
-1
0
1 at 1138.975 kb on + strand, within Dsui_1096 at 1139.036 kb on - strand, within Dsui_1096 at 1139.093 kb on + strand, within Dsui_1096 at 1139.101 kb on - strand at 1139.279 kb on + strand, within Dsui_1096 at 1139.426 kb on - strand, within Dsui_1096 at 1139.431 kb on - strand, within Dsui_1096 at 1139.439 kb on + strand, within Dsui_1096 at 1139.445 kb on - strand, within Dsui_1096 at 1139.488 kb on + strand, within Dsui_1096 at 1139.488 kb on + strand, within Dsui_1096 at 1139.515 kb on - strand at 1139.679 kb on - strand at 1139.745 kb on - strand at 1139.786 kb on + strand at 1139.786 kb on + strand at 1139.792 kb on - strand at 1139.794 kb on - strand at 1139.798 kb on + strand at 1139.832 kb on - strand at 1139.949 kb on - strand at 1140.018 kb on + strand at 1140.029 kb on + strand at 1140.323 kb on + strand, within Dsui_1097 at 1140.370 kb on - strand at 1140.377 kb on + strand, within Dsui_1097 at 1140.539 kb on + strand, within Dsui_1097 at 1140.656 kb on + strand, within Dsui_1097 at 1140.829 kb on - strand, within Dsui_1097 at 1140.934 kb on - strand, within Dsui_1097 at 1140.979 kb on - strand at 1141.031 kb on - strand, within Dsui_1097 at 1141.093 kb on + strand, within Dsui_1097 at 1141.110 kb on + strand, within Dsui_1097 at 1141.196 kb on - strand, within Dsui_1097 at 1141.222 kb on + strand, within Dsui_1097 at 1141.677 kb on + strand, within Dsui_1098 at 1141.765 kb on + strand, within Dsui_1098 at 1141.827 kb on + strand, within Dsui_1098 at 1141.901 kb on + strand, within Dsui_1098 at 1142.116 kb on - strand, within Dsui_1098 at 1142.171 kb on + strand, within Dsui_1098 at 1142.256 kb on + strand at 1142.256 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 1,138,975 + Dsui_1096 0.79 +0.7 1,139,036 - Dsui_1096 0.80 -0.4 1,139,093 + Dsui_1096 0.82 -1.1 1,139,101 - +1.3 1,139,279 + Dsui_1096 0.85 +0.5 1,139,426 - Dsui_1096 0.89 -0.3 1,139,431 - Dsui_1096 0.89 -0.3 1,139,439 + Dsui_1096 0.89 +0.3 1,139,445 - Dsui_1096 0.89 -0.3 1,139,488 + Dsui_1096 0.90 +1.2 1,139,488 + Dsui_1096 0.90 +0.1 1,139,515 - +0.1 1,139,679 - -0.4 1,139,745 - +0.0 1,139,786 + +0.4 1,139,786 + +0.2 1,139,792 - +0.2 1,139,794 - +0.3 1,139,798 + -0.8 1,139,832 - +0.4 1,139,949 - -1.8 1,140,018 + -0.1 1,140,029 + +0.2 1,140,323 + Dsui_1097 0.25 -0.2 1,140,370 - +0.1 1,140,377 + Dsui_1097 0.28 -1.2 1,140,539 + Dsui_1097 0.39 -0.6 1,140,656 + Dsui_1097 0.47 -0.6 1,140,829 - Dsui_1097 0.59 -1.5 1,140,934 - Dsui_1097 0.66 -0.6 1,140,979 - +1.7 1,141,031 - Dsui_1097 0.73 +1.1 1,141,093 + Dsui_1097 0.77 -0.2 1,141,110 + Dsui_1097 0.78 +1.1 1,141,196 - Dsui_1097 0.84 -1.2 1,141,222 + Dsui_1097 0.86 -0.6 1,141,677 + Dsui_1098 0.20 +0.0 1,141,765 + Dsui_1098 0.32 +0.3 1,141,827 + Dsui_1098 0.41 +0.4 1,141,901 + Dsui_1098 0.51 +0.3 1,142,116 - Dsui_1098 0.81 -0.9 1,142,171 + Dsui_1098 0.89 +0.7 1,142,256 + -1.6 1,142,256 + -0.1
Or see this region's nucleotide sequence