Strain Fitness in Dechlorosoma suillum PS around Dsui_1060
Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | rich media with hydrogen peroxide 5 mM |
---|---|---|---|---|---|
remove | |||||
1,091,558 | + | Dsui_1058 | 0.79 | +0.0 | |
1,091,573 | - | Dsui_1058 | 0.86 | +0.1 | |
1,091,596 | + | +1.0 | |||
1,091,596 | + | +1.7 | |||
1,091,604 | - | +0.2 | |||
1,092,282 | - | Dsui_1059 | 0.71 | +0.4 | |
1,092,357 | - | Dsui_1059 | 0.79 | -0.6 | |
1,092,374 | - | +0.7 | |||
1,092,561 | + | -0.9 | |||
1,093,045 | - | Dsui_1060 | 0.54 | -0.3 | |
1,093,047 | - | Dsui_1060 | 0.54 | -1.9 | |
1,093,115 | + | +1.7 | |||
1,093,123 | - | Dsui_1060 | 0.62 | -0.3 | |
1,093,272 | - | Dsui_1060 | 0.78 | +0.3 | |
1,093,345 | - | Dsui_1060 | 0.86 | -2.2 | |
1,093,367 | - | Dsui_1060 | 0.88 | -0.3 | |
1,093,372 | - | Dsui_1060 | 0.89 | -0.5 | |
1,093,471 | - | -0.5 | |||
1,093,476 | - | -0.3 | |||
1,093,477 | - | +0.5 | |||
1,093,481 | + | -0.6 | |||
1,093,481 | + | +0.1 | |||
1,093,518 | - | +0.2 | |||
1,093,741 | + | Dsui_1061 | 0.17 | +0.6 | |
1,093,882 | + | Dsui_1061 | 0.28 | +0.1 | |
1,094,029 | + | Dsui_1061 | 0.40 | -0.2 | |
1,094,053 | + | Dsui_1061 | 0.42 | +0.1 | |
1,094,055 | + | Dsui_1061 | 0.42 | +0.2 | |
1,094,063 | - | Dsui_1061 | 0.43 | -0.5 | |
1,094,068 | - | Dsui_1061 | 0.43 | +1.3 | |
1,094,192 | - | Dsui_1061 | 0.53 | -0.0 | |
1,094,327 | + | Dsui_1061 | 0.64 | +0.2 | |
1,094,427 | + | Dsui_1061 | 0.72 | +0.1 |
Or see this region's nucleotide sequence